Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12430g00001 ATGAATGAACTACCGTCAAACCTGTTGCCCGACGAGGGAAGCCCAGAGTGGATGAACAAGGGGGACAACACGTGGCAGCTCACGACATCTACTCTGGTGGGCCTCCAAAGTGTTCCGGGCCTGATCATCCTCTACGGCAGTATAGTGAAGAAGAAATGGGCTTTGAACTCTGCGTTCATGGCCCTTTACGCATTTGGAGCGGTTCTGGTTTGTTGGGTGGGCTGGTGCTACCAAATGTCATTCGGAGAGAGGCTCCTTCCATTCCTGGGAAAGCCCAATGCGGCCTTGGGCCAGAAATTCCTTATGAGGCCAGCTTTCGTGGGGAGCTTTCCGAACGCCACCATGGTGTACTTCCAGTTGGTGTTCGCTGCCATCACGTTGATTCTCATTGCAGGGGCGTTGCTGGGGAGAATGAACTTCCACGCCTGGATGTTTTTTGTTCCTCTGTGGGTCACTTTCTCGTACACCGTTTCTGCCTTCAGTATATGGAGCCCTCATGGATGGTTGTTCAAGATGGGCCTCATTGATTATTCCGGTGGCTTTGTCATTCACCTTTCATCTGGGGTCGCTGGTTTCACCGCAGCACGCTGGGTAGGACCAAGGACAATGAAGGATAGAGAGAGGTTTCCTCCAAATAACATACTTTTAATGCTGGGTGGGGCTGGGCTTGTATGGATGGGATGGACTGGATTCAACGGTGGAGATCCATACGAAGCCAGCATAGATGCATCTCTTGCCGTCCTTAACACCCACGTATGCACGGCCATGAGCTTCTTGACTTGGGTTCACCTTGACATCCTCTTCTTTGGAAAACCTTCCGTCATTGGTGCCACTCAAGGCATGATCACTGGCTTGGTTTGCATCACCCCTGCTGCCGGTGTGGTACAAGGTTGGGCAGCAATGATAATGGGAATGATGTCAGGAAGCATCCCATGGTACACAATGATGGTCCTGCATAAAGAAATAAGGCTTCTGAAACAGGTGGATGATACCATGGCTGTTTTTCACACGCATGCCGTGGCTGGTTGCTTAGGTGCCATTCTGGCTGGTTTCTTTGCGGACCCAAACCTTTGCCATCTCTTCTATGGGGTACAAGTACAAGGCTCTCAGCTCTATACGGGCCTTGCTTATGGTATCTTCATGGGGAAGACCAAGGCAGGCTTCAGGCAAATGGGGGTCCAGCTTCTTGGTATTGTCTTTGTCATACTAGTCAATGTAACCGTAACTACCATGGTGTGTTTCTTGGTTAAGATCTTAGTTCCACTCAGGCTGCACGAAGATGACTTGCAAGTTGGGGATGATGCTGTCCATGGCGAGGTTGCCTATGCCTTGTGGGGCGATGGACAAAAGCTTGAGACTGCCAATCACCCTTTTACTTTTCAAAACAATCATCAATGCTCAACTGTGGAACCAAAAACTTCCACTCATGCTCAATTCGAATGA 1443 0.5003 MNELPSNLLPDEGSPEWMNKGDNTWQLTTSTLVGLQSVPGLIILYGSIVKKKWALNSAFMALYAFGAVLVCWVGWCYQMSFGERLLPFLGKPNAALGQKFLMRPAFVGSFPNATMVYFQLVFAAITLILIAGALLGRMNFHAWMFFVPLWVTFSYTVSAFSIWSPHGWLFKMGLIDYSGGFVIHLSSGVAGFTAARWVGPRTMKDRERFPPNNILLMLGGAGLVWMGWTGFNGGDPYEASIDASLAVLNTHVCTAMSFLTWVHLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAMIMGMMSGSIPWYTMMVLHKEIRLLKQVDDTMAVFHTHAVAGCLGAILAGFFADPNLCHLFYGVQVQGSQLYTGLAYGIFMGKTKAGFRQMGVQLLGIVFVILVNVTVTTMVCFLVKILVPLRLHEDDLQVGDDAVHGEVAYALWGDGQKLETANHPFTFQNNHQCSTVEPKTSTHAQFE 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12430g00001 480 PANTHER AMMONIUM TRANSPORTER MEP2 6 454 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mupr12430g00001 480 NCBIfam ammonium transporter 22 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mupr12430g00001 480 SUPERFAMILY Ammonium transporter 17 424 - -
Mupr12430g00001 480 Pfam Ammonium Transporter Family 25 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mupr12430g00001 480 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005886
Mupr12430g00001 480 PRINTS Rhesus blood group protein signature 301 319 IPR002229 GO:0005886
Mupr12430g00001 480 PRINTS Rhesus blood group protein signature 246 268 IPR002229 GO:0005886
Mupr12430g00001 480 PRINTS Rhesus blood group protein signature 215 233 IPR002229 GO:0005886
Mupr12430g00001 480 FunFam Ammonium transporter 7 445 - -
Mupr12430g00001 480 Gene3D Ammonium transporter AmtB like domains 9 460 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12430g00001 Mupr-Chr12430 678 2284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12430g00001 113 467 Inorganic Solute Cotransporters AT2G38290 56.056 1.44e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12430g00001 K03320 - gmx:112999382 796.964