Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12427g00003 ATGGCCACTTCTCTCCATGCTACTGCTTCCTCTGCCTCTCTCACAACACAACACAATGAAGCAAATGCTTTGTGGAAGTGGAAAGCCAGCCTTGACAACCAAAGTCAAATTTTGCTATCTTCATGGGGTGGCAATAGTTCTTGCAATTGGCTTGGAATTTCTTGTGACAATTCTCAATCTGTCTCACACATAAATCTTACAAATATTGGATTAAAAGGTACTCTTGAAACTCTCAATTTTTCATCACTTCCAAACATTATCACTCTTGATATGAGGAATAACTCATTGAATGGAAGTATTCCTCCTCAAATTGGGGTGTTGTCTAAACTCACTTATCTTGATTTAAGGGACAATCATCTCTCTGGACCAATTCCATCTGAAATTACTCAGTTGGTCAGTCTTCATGTTTTATATTTGTCAAATAATGTTTTCAGTGGTTCAATTCCTCAAGAAATAGGTGCATTAAGGAATTTGAGAGAGATTATTATTGAATTTGCCAATCTCACAGGGACTATTCCAAATTCTATAGGAAAGTTATCCTTCTTGTCATATCTTTCTTTTTGGAATTGTAGTCTCACTGGGTCTATCCCAATTTCTATAGGAAAGTTGACCAATTTGTCTTATCTAGATTTTACCCGGAACAAACTTTATGGACATATTCCTCACGAAATTGGGAATTTGTCCAAGTTAAAGTATCTGTGGCTTGGATTTAATAACTTTGATGGTTCTATTCCTCAAGACATAGGGAAGTTGCAGACTCTTGAGGTTATACATCTTCAAGAGAACAAAATCTCTGGCCACATTCCCGTGGAAATTGGGAAGTTACTCAACTTGACAGAGTTGTGGCTTCAAAACAATGGTCTTTTTGGTTCCATTCCTCAGGAAATTGGGAAGTTAACCAACTTGGAGCAATTATTGCTTTCAAACAATAATCTTTCGGGTTCTATTCCTCAAGAAATTGGGACGTTAACCAACTTGGAGTATTTATTGCTTTTAAACAATAATCTTTCGGGTTCTATTCCTCAAGAAATTGGAATGATGACAAACATGCGTCAACTCGATTTGTCCAATAACTCTTTGTCAGGTACAATCCCCCCTACAATTGGAAATCTGAGCAATTTAACTCATTTTTACAGTTTTGGCAACCATCTATCTGGTTCCATTCCTAATGAAGTTGGAAAACTCAAATTTCTTGTCACACTCCAGTTGTTAGACAATCATCTCTCTGGGCCAATCCCATCTTCCATAGGCAATTTGGTCAATTTGGACTCTATTCGCCTTAATGGAAATAAACTCTCTGGACCAATTCCTTCCACTTTTGGAAACTTGACAAAGCTCACCAACCTTCTTCTAATGTCAAATAACCTCAGTGGGCGCATTCCAATAGAAATAAACAAGCTTGATAACCTGGAAAATTTGCAATTATATGACAATAATTTCATAGGCCATTTGCCTCACAACATTTGCATCAGTGGAAAGTTGATAAAGTTTACTGCTAGCAATAACTATTTCACAGGCCCAATACCAAAGACTTTGAAGAACTGCTCCAGCCTTAGAAGAGTTTGGCTTCAACAAAACCAATTGACTGGAAATATAGCAGATGATTTTGGTGTATATCCAAACTTGGATTACATAGACCTGAGTGAAAATAACTTTTATGGTCATCTTTCCCCAAAATGGGGAAAGTGCCATAATCTCACAGGCCTCAAAATCTCCAACAACAATTTATCAGGCAGTATTCCACCAGAACTAAGTCAGGCAACCAATTTACGTCTACTTCACTTATCTGCAAACCATCTTACAGGAGACATTCCAAAAGATTTGGCTAATTTGACCTTCTTGTTCAGTTTCTCTATCAGTAACAATAATTTTTCAGGAAATTTCCCTGTACAGATAACATCACTCCAAAATCTTGAAACCTTAGAGCTTGGAGCAAATAATTTTAGTGGCTTGATTCCAAATCAACTTGGAAATTTGCGCAAGTTATTACAATTGAATTTGAGCCAAAATAACTTCAGGGAAGGTATTCCGCCAGAGTTTGGTGAGTTAAGATACCTTCAAAGTCTTGATCTTAGTGGAAATTTTTTGAGTGGAACAATACCACCAATGCTGGGAGAGTTGAAAAGCTTAGAAACATTGAATCTCTCGCACAATAATCTTTCAGGCGATCTTTCTAGCTTTGATGATATGTTAAGCTTGATATCTGTTGATGTATCATACAACCAATTAAAGGGTCCACTTCCAAACATTCCAGCCTTCAATAAGGCTACAATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCTCTGGCTTGGAACCATGTCCAACATCAAGTGGAAAATCTCACAGTCACAAGACTAACAAAGCCATAATAGTATTTGTGCCTGTTGGTTTGGGCACTTTAATACTAGTATTATTTGCCTTTGGATTCTCATATCATCTTTGTCGATCTTCAAAGACAAAAGAATGTCAGGATGAAGAACCACAAACCCAAAGTCTATTTGCAATATGGAGTTTTGATGGAAAAGTAGTGTATGAGAACATAGTTGAAGCCACAGAAGAGTTTGACAATAAACATCTCATTGGGGTTGGAGGACAAGGAAGTGTTTACAAAGCAGAATTGCACACAGGTCAAATTGTTGCTGTGAAGAAACTCCATTCAGTACAAAATGGTGAAATATCCAATATAAAAGCTTTCACAAGTGAAATTCAAACTTTGACAGAAATTCGACATCGTAACATTGTCAAGTTATATGGGTTTTGTTCTCATTCACAATTCTCATTTTTGGTATATGAGTTCTTGGAAAAGGGTAGCATGAACAGGGTTTTACAAGATGATGAACAAGCAATTGCATTTGATTGGAATAAGAGGATTGATGCTATTAAAGGTGTAGCAAATGCTTTATGCTATATGCATCACGACTGTTCACCTCCAATTGTTCATCGAGATATATCAAGCAAAAATATTCTTCTGGATTTTGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCTAAGCTTCTTAATCCCAATTCAACCAATTGGACTTCATTTGCAGGAACTTTTGGATACGCTGCTCCAGAACTTGCATACACAATGGAGGTAAATGATAAATGCGATGTGTATAGCTTTGGGGTATTAGCATTGGAAATACTTTTTGGAGAGCACCCTGGAGATTTTATAACTTCTTCATTGTGGACATTTTCATCAAATGTCATGGCCTCAACACTTGATATTCCTTCATTGATGAGTAAGTTAGACCAACGTCTCCCTTATCCTGAAAATCCTATTGCTGAGGAGATAGTTTTGATTATAAGGATAGCAAATGCTTGCTTGACTGAAAGCCCTCGTTCTCGCCCTACCATGGAGCAAGTTGCCAAGGATCTTGCAATGTCAAAGGCTGCACCTAAACTTCTAGCAGGGTTGATGCCAGTGCCAGTGATAGGAATTGTAGCCAAATGCACCAGAAAGACCGCAAAACCGATAGGCAATGGTGCCAAAATCTAA 3516 0.3746 MATSLHATASSASLTTQHNEANALWKWKASLDNQSQILLSSWGGNSSCNWLGISCDNSQSVSHINLTNIGLKGTLETLNFSSLPNIITLDMRNNSLNGSIPPQIGVLSKLTYLDLRDNHLSGPIPSEITQLVSLHVLYLSNNVFSGSIPQEIGALRNLREIIIEFANLTGTIPNSIGKLSFLSYLSFWNCSLTGSIPISIGKLTNLSYLDFTRNKLYGHIPHEIGNLSKLKYLWLGFNNFDGSIPQDIGKLQTLEVIHLQENKISGHIPVEIGKLLNLTELWLQNNGLFGSIPQEIGKLTNLEQLLLSNNNLSGSIPQEIGTLTNLEYLLLLNNNLSGSIPQEIGMMTNMRQLDLSNNSLSGTIPPTIGNLSNLTHFYSFGNHLSGSIPNEVGKLKFLVTLQLLDNHLSGPIPSSIGNLVNLDSIRLNGNKLSGPIPSTFGNLTKLTNLLLMSNNLSGRIPIEINKLDNLENLQLYDNNFIGHLPHNICISGKLIKFTASNNYFTGPIPKTLKNCSSLRRVWLQQNQLTGNIADDFGVYPNLDYIDLSENNFYGHLSPKWGKCHNLTGLKISNNNLSGSIPPELSQATNLRLLHLSANHLTGDIPKDLANLTFLFSFSISNNNFSGNFPVQITSLQNLETLELGANNFSGLIPNQLGNLRKLLQLNLSQNNFREGIPPEFGELRYLQSLDLSGNFLSGTIPPMLGELKSLETLNLSHNNLSGDLSSFDDMLSLISVDVSYNQLKGPLPNIPAFNKATIEALRNNKGLCGNVSGLEPCPTSSGKSHSHKTNKAIIVFVPVGLGTLILVLFAFGFSYHLCRSSKTKECQDEEPQTQSLFAIWSFDGKVVYENIVEATEEFDNKHLIGVGGQGSVYKAELHTGQIVAVKKLHSVQNGEISNIKAFTSEIQTLTEIRHRNIVKLYGFCSHSQFSFLVYEFLEKGSMNRVLQDDEQAIAFDWNKRIDAIKGVANALCYMHHDCSPPIVHRDISSKNILLDFEYVAHVSDFGTAKLLNPNSTNWTSFAGTFGYAAPELAYTMEVNDKCDVYSFGVLALEILFGEHPGDFITSSLWTFSSNVMASTLDIPSLMSKLDQRLPYPENPIAEEIVLIIRIANACLTESPRSRPTMEQVAKDLAMSKAAPKLLAGLMPVPVIGIVAKCTRKTAKPIGNGAKI 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12427g00003 1171 FunFam Piriformospora indica-insensitive protein 2 196 293 - -
Mupr12427g00003 1171 ProSiteProfiles Leucine-rich repeat profile. 709 731 IPR001611 GO:0005515
Mupr12427g00003 1171 Gene3D Ribonuclease Inhibitor 16 166 IPR032675 -
Mupr12427g00003 1171 PANTHER LEUCINE RICH REPEAT KINASE 2 416 1137 - -
Mupr12427g00003 1171 Gene3D Ribonuclease Inhibitor 363 465 IPR032675 -
Mupr12427g00003 1171 Gene3D Ribonuclease Inhibitor 167 266 IPR032675 -
Mupr12427g00003 1171 Gene3D Ribonuclease Inhibitor 267 362 IPR032675 -
Mupr12427g00003 1171 FunFam Leucine-rich repeat receptor protein kinase MSP1 821 936 - -
Mupr12427g00003 1171 SUPERFAMILY L domain-like 19 289 - -
Mupr12427g00003 1171 Pfam Protein kinase domain 859 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12427g00003 1171 ProSiteProfiles Protein kinase domain profile. 858 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12427g00003 1171 PRINTS Leucine-rich repeat signature 350 363 - -
Mupr12427g00003 1171 PRINTS Leucine-rich repeat signature 707 720 - -
Mupr12427g00003 1171 FunFam Leucine-rich receptor-like protein kinase family protein 294 389 - -
Mupr12427g00003 1171 ProSitePatterns Tyrosine protein kinases specific active-site signature. 982 994 IPR008266 GO:0004672|GO:0006468
Mupr12427g00003 1171 SUPERFAMILY L domain-like 512 769 - -
Mupr12427g00003 1171 Pfam Leucine rich repeat 685 743 IPR001611 GO:0005515
Mupr12427g00003 1171 Pfam Leucine rich repeat 540 600 IPR001611 GO:0005515
Mupr12427g00003 1171 Gene3D Transferase(Phosphotransferase) domain 1 937 1141 - -
Mupr12427g00003 1171 FunFam MDIS1-interacting receptor like kinase 2 937 1138 - -
Mupr12427g00003 1171 Pfam Leucine Rich Repeat 350 371 IPR001611 GO:0005515
Mupr12427g00003 1171 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 390 484 - -
Mupr12427g00003 1171 Gene3D Ribonuclease Inhibitor 469 780 IPR032675 -
Mupr12427g00003 1171 FunFam Nuclear pore complex protein NUP107 17 173 - -
Mupr12427g00003 1171 Pfam Leucine rich repeat N-terminal domain 19 56 IPR013210 -
Mupr12427g00003 1171 SMART LRR_typ_2 203 226 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 131 155 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 227 251 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 467 491 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 707 729 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 635 658 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 347 371 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 275 298 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 419 442 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 83 107 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 659 683 IPR003591 -
Mupr12427g00003 1171 SMART LRR_typ_2 299 323 IPR003591 -
Mupr12427g00003 1171 SUPERFAMILY L domain-like 245 531 - -
Mupr12427g00003 1171 Gene3D Phosphorylase Kinase; domain 1 818 936 - -
Mupr12427g00003 1171 SMART LRR_sd22_2 635 661 - -
Mupr12427g00003 1171 SMART LRR_sd22_2 107 136 - -
Mupr12427g00003 1171 SMART LRR_sd22_2 347 373 - -
Mupr12427g00003 1171 SMART LRR_sd22_2 203 229 - -
Mupr12427g00003 1171 SMART LRR_sd22_2 275 304 - -
Mupr12427g00003 1171 SMART LRR_sd22_2 443 472 - -
Mupr12427g00003 1171 SUPERFAMILY Protein kinase-like (PK-like) 838 1133 IPR011009 -
Mupr12427g00003 1171 FunFam Uncharacterized protein 489 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12427g00003 Mupr-Chr12427 46585 52744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12427g00003 9 654 Receptor kinase-like Gene Family AT4G08850 36.391 7.00e-106 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr12427g00003 Pkinase 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12427g00003 - - gsj:114395001 1603.57