Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12427g00002 ATGGAGGGGAGAGATGAGGATGTTAGAGTAGGAGCCAACAGGTATGGAGAGAGGCAAGCAATAGGAACAGGTGCACAGACACAAGATGCCAAAGACTACAGAGAGGCACCACCAGCTCCACTGTTTGAGCCTAGAGAGTTAACATCATGGTCTTTCTACAGAGCAGGCATAGCAGAATTTGTGGCCACATTCTTGTTTCTTTATATCACTGTTTTGACAGTGATGGGAGTGGCAAAATCTCCCTCCAAGTGCTCCACTGTGGGGGTCCAAGGTATTGCTTGGTCATTTGGTGGAATGATCTTTGCCCTTGTTTACTGCACCGCTGGTATCTCAGGGGGTCACATTAACCCAGCTGTGACATTTGGGCTGTTCTTGGCACGCAAGTTATCTCTCACTAGAACACTGTTTTACATGATCATGCAGTGCTTGGGAGCTATATGTGGTGCTGCTGTAGTCAAGGGATTCCAATCAAACCAATATGAGAGGCTTGGTGGTGGTGCCAACACTCTCAATAAAGGATACTCCAAAGGTGATGGCCTTGGAGCAGAGATTCTTGGCACATTTATTCTTCTTTACACCGTTTTCTCTGCCACAGATGCCAAGCGAAATGCTAGAGACTCGCATGTTCCTATTTTGGCACCATTGCCTATCGGTTTTGCGGTCTTTCTGGTGCATTTGGCTACAATTCCTATCACTGGCACTGGCATCAACCCTGCTAGAAGTTTAGGTGCAGCCCTTGTATACAACAAGGACCAAGCTTGGGATAACCATTGGATCTTCTGGGTAGGGCCTTTTACTGGGGCAGCACTTGCAGCTTTGTACCATCAGATAGTGATCAGGGCCATTCCTTTTAAGTCAAAATGA 864 0.4699 MEGRDEDVRVGANRYGERQAIGTGAQTQDAKDYREAPPAPLFEPRELTSWSFYRAGIAEFVATFLFLYITVLTVMGVAKSPSKCSTVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTLFYMIMQCLGAICGAAVVKGFQSNQYERLGGGANTLNKGYSKGDGLGAEILGTFILLYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALVYNKDQAWDNHWIFWVGPFTGAALAALYHQIVIRAIPFKSK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12427g00002 287 SUPERFAMILY Aquaporin-like 45 280 IPR023271 -
Mupr12427g00002 287 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 Gene3D Glycerol uptake facilitator protein. 39 286 IPR023271 -
Mupr12427g00002 287 NCBIfam MIP family channel protein 58 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Mupr12427g00002 287 CDD MIP 54 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr12427g00002 287 FunFam Probable aquaporin PIP1-2 39 287 - -
Mupr12427g00002 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 283 IPR034294 -
Mupr12427g00002 287 Pfam Major intrinsic protein 46 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12427g00002 Mupr-Chr12427 45293 47019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12427g00002 1 287 Major Intrinsic Protein MIP AT3G61430 81.533 4.04e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12427g00002 K09872 - gmx:100809467 568.54