Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12424g00003 ATGGAGAACGACACTGTGGCCATAATTGGTCCCCAGTTCTCGGTCATGGCTCATGTGATTTCACATATTGCAAATGAGATGCAAGTGCCTCTACTTTCATTTGCTGCAACGGATCCTACACTGACTTCACTGCAGTTCCCATATTTTGTGAGGACAACACATAGTGATCTGTATCAGATGGCTGCTGTGGCAGACATTGTTGACCACTTTCAATGGAGAGATGTCATAGCAATTTACATCGATGATGATCATGGAAGAAATGGGGTGGCTGCATTAGGGGACAAGCTAGCAGAGAAACGTGGTAAAATATCACACAAAGCACCATTTAGGCCTGATAATAACATTACCCGGGAAGAAATAAACAGTGCATTGGTTAAGATAGCTTTAATGGAATCAAGGGTAATAGTCCTTCATATATACCCTTCTTTTGGTCCCAGAGTACTGCATGAGGCTCGCTCACTTGGCATGATGGGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACAGTACTAGATTCTGATCCATCATTGTTCACAACTCAAGCCATGAATGACATCCAAGGTGTTATCACCTTGCGCATGTATACACCAGAGTCAGAAATCAAAAGAAAATTCAGTTCTAGGTGGAACAAACTGAGCCAAGAAAAGGATCCTGATGAGGGTCCTTTTGCATTGAACACCTTTGGCCTTTACGCCTATGACACTGTTTGGGTGCTTGCTTCAGCACTCGATGCATTTTTTAAGAGTGGGGGAACTTTGTCTTTTTCAAATGATTCGAGTCTAAACATATTAAGAGGGGACACCCTTCACCTGGATACTATGGGGGTATTTGTTGATGGTGGCGTGTTGCTTCAAAAGATTTTAGAAGTGAACAGAACTGGTTTAACAGGCCAAATGGTGTTTGGTCCTGATGGAAACTTGGTGCATCCATCATATGAAATAATTAATGTGATAGGCACTGGAATTAGGAGGATTGGTTATTGGTCTGAAACCTCTGGCCTCCACACAGGGGAAGCTCCTAATCGTTCCAATTCTAGTGAAGGACTATATGGTATCATATGGCCTGGTCAAACAACCCAAACCCCACGTGGTTGGGTTTTTGCCAGCAATGGAAGACACTTGAGAATTGGGGTGCCTCTCAGAATTAGTTACCGTGAGTTTGTGTCAAGAACTGAGGGGACTGACACTTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCGCTCAACTTGTTGCCTTATCCTGTTCCCTTCAAGTTTGTTCCATTTGGAGATGGTAAAACCAACCCACTAAATGCAAAACTTCTCAACATGGTCACAGTTGGGGAGTTCGATGCTGTTGTGGGGGACATTACCATTACCACAAACCGAACTAAGATAGTGGATTTTACACAGCCATATATCGAGTCTGGGCTAGTTGTTGTGGCACCTATTAGGAAGATGAAATCAAGTCCTTGGGCTTTCCTAAGACCATTCACTCCAATGATGTGGTTTGTCACAGGAATGTTTTTCTTAGTTGTGGGAGCTGTTGTGTGGATTTTAGAACGTCGCTTAAATGATGACTTTAGAGGCCCGGCAAGAAGGCAATTTGTGACCATTATATGGTTTAGCTTTTCAACCCTGTTTTTTGCACATAGAGAAAAAACTGTGAGCACCCTTGGTCGCTTAGTACTAATCATATGGTTGTTTGTGGTTTTGATACTCAACTCAAGTTATATTGCAAGCTTGACCTCCATCCTAACCGTGGAACAGCTCTCATCCTCAGTTAAGGGGATTGAAAGCTTAGCAATAAGCAACGAACGCATTGGTTTTCTGAGTGGCTCATTTGCTGAAAATTATCTGACAGAGGAGCTCAACATACACAGGTCAAGGCTTGTTCCTCTCAACTCACCATCAGAATATGAAAAGGCCTTGAAGGATGGCCCTGCTAATGGAGGCGTCACTGCAATAATAGATGAACGTGCATACATGGAGCTCTTCCTCGCAACCAGATGTCAATACGGTATTGTTGGCCAAGAGTTCACCAAAATGGGTTGGGGCTTTGTAACAAGTGAGTGGAACATGTTTAAATTATTACAGGCCTTCCCAAGAGAGTCTCCCCTAGCAATTGACATGTCCACTGCGATCCTGAAACTATCAGAGAATGGTGATCTGCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCGTGCAGCTCAGAGGGTGCAAAACAAGGCATAGACCGACTTGAGCTAAAGAGCTTTTGGGGTCTGTTCCTACTTAGTGGCATAGCATGCTTCATTGCTCTCCTTTTCTATGTTATTAGAATGGCCTACCGTTTCAGCAGACACCCCGATAGTATCCCTGAGGGATCATCACGCTCTGCTCGTCTTCGATCGTTCCTTTCCTTTGTCAATGAAAAAGAAGAGGAAGACAAATACGTGTCAAAGAGAAAACGAAACGAAAAGGGTTCTAGCAGAAGGGTGGCGCATGAAGATGGCTTCAATGGTTCAAGTGTTAGTGTCCATATTGAAAACCATGCCTAA 2532 0.4344 MENDTVAIIGPQFSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTHSDLYQMAAVADIVDHFQWRDVIAIYIDDDHGRNGVAALGDKLAEKRGKISHKAPFRPDNNITREEINSALVKIALMESRVIVLHIYPSFGPRVLHEARSLGMMGSGYVWIATDWLSTVLDSDPSLFTTQAMNDIQGVITLRMYTPESEIKRKFSSRWNKLSQEKDPDEGPFALNTFGLYAYDTVWVLASALDAFFKSGGTLSFSNDSSLNILRGDTLHLDTMGVFVDGGVLLQKILEVNRTGLTGQMVFGPDGNLVHPSYEIINVIGTGIRRIGYWSETSGLHTGEAPNRSNSSEGLYGIIWPGQTTQTPRGWVFASNGRHLRIGVPLRISYREFVSRTEGTDTFGGYCIDVFTAALNLLPYPVPFKFVPFGDGKTNPLNAKLLNMVTVGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSSPWAFLRPFTPMMWFVTGMFFLVVGAVVWILERRLNDDFRGPARRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSSVKGIESLAISNERIGFLSGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVTAIIDERAYMELFLATRCQYGIVGQEFTKMGWGFVTSEWNMFKLLQAFPRESPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALLFYVIRMAYRFSRHPDSIPEGSSRSARLRSFLSFVNEKEEEDKYVSKRKRNEKGSSRRVAHEDGFNGSSVSVHIENHA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12424g00003 843 Pfam Bacterial extracellular solute-binding proteins, family 3 385 729 IPR001638 -
Mupr12424g00003 843 FunFam Glutamate receptor 371 487 - -
Mupr12424g00003 843 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr12424g00003 843 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr12424g00003 843 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr12424g00003 843 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mupr12424g00003 843 SUPERFAMILY Periplasmic binding protein-like I 2 367 IPR028082 -
Mupr12424g00003 843 CDD GluR_Plant 376 728 - -
Mupr12424g00003 843 Gene3D - 487 624 - -
Mupr12424g00003 843 Pfam Ligand-gated ion channel 730 761 IPR001320 GO:0015276|GO:0016020
Mupr12424g00003 843 Pfam Receptor family ligand binding region 3 321 IPR001828 -
Mupr12424g00003 843 SMART GluR_14 377 730 IPR001320 GO:0015276|GO:0016020
Mupr12424g00003 843 MobiDBLite consensus disorder prediction 808 825 - -
Mupr12424g00003 843 Gene3D - 1 311 - -
Mupr12424g00003 843 MobiDBLite consensus disorder prediction 808 835 - -
Mupr12424g00003 843 FunFam Glutamate receptor 55 214 - -
Mupr12424g00003 843 FunFam Glutamate receptor 613 732 - -
Mupr12424g00003 843 FunFam Glutamate receptor 487 617 - -
Mupr12424g00003 843 SUPERFAMILY Periplasmic binding protein-like II 353 730 - -
Mupr12424g00003 843 PIRSF IGluLR_plant 1 838 IPR017103 -
Mupr12424g00003 843 Gene3D - 55 336 - -
Mupr12424g00003 843 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 804 IPR015683 -
Mupr12424g00003 843 Gene3D - 676 735 - -
Mupr12424g00003 843 Gene3D - 370 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12424g00003 Mupr-Chr12424 5262 9428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12424g00003 1 822 Ion Channels AT1G42540 58.678 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12424g00003 K05387 - gmx:100790502 1513.43