Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1240g00012 ATGTCTCGAGAATTGACAAGTCATGGTGTTTTTGGATTCTACAAAGGGGCTGCTCAACTCACTTTTGTAGTGGGATCCCATGTTTGGATTGAGGACCCCGATTCAGCTTGGATAGATGGAGAAATCCAGGAGGCTTCGGCCGGAAATATCACGGTTATCTATGAAGCTGGCACCAAGGTTGTGAGCAAATCAGCCAACATGTATCCCAAAGATCCAGAATTCCCACCTAATGGTGTGGAAGATATGACAAGATTGGCATATCTGCATGAACCAGGAGTACTTCAAAATTTGCAAATTCGATATTCCAATAATGAAATTTATACATACACAGGAAATATATTGATAGCCGTGAACCCTTTTAAAAGGTTACCTCATTTGAGTGAACATAGTACCATGGCTAGGTATAAAGGTGCGGCTTTTGGTGAGCAGAGCCCACATCCTTTTGCAATTGCAAGTTCTGCATATAGCAAGATGATAAACGAAGAAAGAAGCCAATCAATTTTGGTTAGTGGAGAAAGTGGAGCTGGCAAAACTGAAAGTACAAAGATGCTTATGCATTATCTTGCCTTTTTGGGAGGGAGAGCAGCAACTGAAGGACGGTCTGTGGAGCAACAAGTTCTGGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACATATTTGCTGGAACGATCCCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATGTCGATAGGTTCAAATTGGGAAATCCAAGAAAATTTCATTACCTTAATCAATCAAATTGCATTGAGCTGGATGGGGTGGATGATTCTAAGGAGTACGTTGCAACTAAGAGAGCTATGGATGTTGTTGGGATCAGCACTAGTGAGCAGGTGCCCCTCAGTAACATCCCTATTGGAATAAAAATTTGCCATCCCTCTTCTCAGGATGCTATATTTCGAATAGTAGCTGCAGTACTTCATCTAGGAAACATTGAATTTGTTAAGGGAGGGGAAGAGGAACTGGATTCCTCTCAGCCCAAGGATGAAAAATCCCATTCCCACCTAAAAACTGCAGCTGAGCTTTTGATGTGTGATCAGAAGTCCCTTGAAGATTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGACACCATAACAAAATCGCTTGATCCAAATTCTGCAGCTCTCAGTAGAGATGCATTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTGGACAAGATTAACAACTCTATTGGGCAAGATCCAGATTCAAATCACTTAATTGGGGTTCTAGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAACAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTAATTGGAGTTATATTGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAGAAGGTTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACCTTTAAAGATAATAAACGCTTCAGCAAGCCAAAGTTGTCTCGCACTGACTTCACCATTAACCACTATGCCGGTGATGTCACTTATCAAACAGATCTTTTCCTTGATAAAAATAAAGACTATGTTGTTCCAGAGCATGCTGCCCTACTCAGTGCTTCGAAATGCCCCTTTGTTTCAGGGCTGTTCCCACCTTTACCTGAGGAAACTACAAAATCGACAAAGTTCTCTTCTATAGCCGCTCAATTTAAGCTACAACTGCAATCTTTGCTTGAAACACTAAATGCTACCGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTGAAGCCAGGGATATTTGAGAACAATAATGTGTTGCAGCAGCTTCGATGTGGAGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGAGCTTTGATGAATTTGTTCAGCGATTTACTATCCTGGAACCTAAGGTTCTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCAAACCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTGGGAATATCTGCAAGCATTATTCAGAGAAGAGTCCGCACGTTTCTTTGTCGGAAAGTCTTCATTTTATTGAAGTTGTCTGCCATAGAACTTCAAAGGGTTGCTAGAGGACTACTTGCACGACATCAGTATGAATGCATGAGGAGGGAAGCTGCTTCTATGAAAATCCAGAAAGACTTCCGCATGTATATTTCCAGAAATGCTTACAAAACTATTTATGCCAAAGCTGTTTGTATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGACCTTAGATTCAAGAGACGGACAAAAGCTTCAATTCGTATTCAGGGTCACTACAGAGGTTATTCAGCTCGTACTTATTTCAAGAAGTTAAAGAAATCAACAATTGCTACGCAGTGTTCCTGGAGGAGAACATTGGCACGTAGAGAACTTCGAAAGCTTAAAATGGCTGCCAGGGAATCCAAGGCACTTGAAGCTGCCAAAAATAATTTGGAAAAGCAAGTCAAAGAATTAATTTTGTCTCTAGAAACAGAGCAGAGACTGAGGGAAGCCGAGACACAGGAAAATGAAAAACTACAGCATGCTTTGCAAGAGATGGAGGTTCAGTTGCAAGAAACTAAGGCAGTGCACATTCAGGAAAATGAAAAACTACAGCATGCTTTGCAAGAGATGGAGGTTCAGTTGCAAGAAACTAAGGCAGTGCACAATCAGGAAAATGAAAAACTACAGCATGCTTTGCAAGAGATGGAGATTCAGTTCCAAGAAACTAAGGCAGTGCACATTCAGGAAACCGAAAAACTACAGCATGCTTTGCAAGAGATGGAGCTTCAGTTCCAAGAAACCAAGGCAGCGCTCATTCAGGAACGAGAGGCTGCCAATAAAGTAGTTGAGCAAACTCCAACTATACAGGAGAATTCTGTAAATGTTGTTGATAGTGAATTGATCAATAAGCTCACTGCAGAAAATGAACAACTCAAGGAACTGGTTAATTCATCGGAAAAGAAAACTGTACAGGAGTTTCCTGTTAATGTTAGTGACAATGAGTTGATCAATAAACTTACTTCAGAAAATGAACATCTTAAGGAATTAGTTAATTCATTGGAAAAGAAAACTGTACAAGAGTTTCCTGTTGTTAGTGACAATGAGTTGATCAATAAACTTACTTCAGAAAATGAACATCTTAAGGAACTGATTAATTCCTTGGAAAAGAGAACTGGCCAGGAGTTTCCTGTTAATGTTACTGACAATGAAATGATCAATAAACATACTACGGAAAATGAAACTTATAAGGATCAGGTTAGTTCATTGGAAAAAAAAATTGATGAAACAGAGAGGAAATATGAAGAAAGTAACAGGCTTAGTGAGGAGCGCATGAATCAAATTATAGAGACAGAATCAAAGATGATTGAGATAAAGACAAATATGCAGAGGCTTGAAGAAAAACTATCTGATATGGAAACTGAGAATCAAGTTTTGCGGCAGCAAACCTTGTTAAGTTCATCATCCAAAAGAATGTCAGGATCGTTTTCACCTGCTACTACAGCTCCGCCTCTGGAAAATGGTCATCAGGTGGCGGCATCACAGGGTTCTATTCCTGCAAAAACATTTGGTTTAGAGGATACTAAACAAAGGAGATCTCTTATGGAGAGGCATCAAGAGAGTGTAGATGCTCTTTTCAGTTGTGTGACAAAAGATCTTGGGTTCTGTGAAGGAAAACCTGTTGCAGCATTTACCCTTTACAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAGACAAGCATATTTGATCGTCTTATTCAGTTGATTGGTTCTCAAATAGAGGATCCGGACAAAAATGATTGTATGGCTTATTGGCTATCCAACACATCTTCTTTGTTTTTCCATCTTCAGCGATGTCTAAGAGTACCTACAGCACGGAAACCACCCACTCCAACATCGTTTTTTGGGAGGATGACCCAGGGTTTCCGCTCATCTAATAGTCTTTCCAGCAGTGCTTTTGATGTAGTGCATCAGGTTGATGCCAAGTATCCAGCTTTACTTTTCAAGCAACAGCTTGCAGCTTATGTGGAAAAGATATATGGAATCGTTCGAGAAAATTTTAAGAAAGACTTGTCACCTCTTCTTTCTTCTTGCATTCAGGTAGACAGAACATCAAATGACAACAGCCTTTGGCTCGGCATTAACGAATGCCTTAATAAATATCTCAAGATTCTGAAAGAAAACTATGTGCCTCAAGTTCTAGTTCAGAAGCTATATAATCAAATTTTTCAATACATCAATGTGGAACTCTTTAATAGCCTTCTTTTACATCGAGAATGCTGCACATTAGAAAATGGAGAATATATAAAATCAGGGTTGGCTGAACTAGAACAATGGTGTGGTGAAGCAACCGAAGAGTATGTTGGCTCGGCTTTGGATGAACTTAAACATGCAACGCAAGCAGTTAAATTCTTGGTTGCAGAACAGAAGGATGGGCTATCCTATGATGATCTTACAAATGACGTCTGCCCTGTCCTGAGTGCTCAACAGCTTTATAGAATATGTACACTTTACTGCGGTGATAATGATGACAATAAACAAAATGTATCACCGGATGTCACTTCTAGATTGAAGCTTCTAATGACAGATGCAGAAGAAGATGACAAATCTTTCTTGTTGGAGGACAACACGAGTCATCCTATTATTGTTGAAGAGATTCCTAGTTCAGCTCAAGATAAGACCATTCCTAAAATAACTCCTCCTGCAGAACTTCTTGAGAATGCAAACTTCCAATTTCTACATGATTAT 5052 0.3949 MSRELTSHGVFGFYKGAAQLTFVVGSHVWIEDPDSAWIDGEIQEASAGNITVIYEAGTKVVSKSANMYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLQIRYSNNEIYTYTGNILIAVNPFKRLPHLSEHSTMARYKGAAFGEQSPHPFAIASSAYSKMINEERSQSILVSGESGAGKTESTKMLMHYLAFLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVDRFKLGNPRKFHYLNQSNCIELDGVDDSKEYVATKRAMDVVGISTSEQVPLSNIPIGIKICHPSSQDAIFRIVAAVLHLGNIEFVKGGEEELDSSQPKDEKSHSHLKTAAELLMCDQKSLEDSFCKRVMVTRGDTITKSLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPDSNHLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKVMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTINHYAGDVTYQTDLFLDKNKDYVVPEHAALLSASKCPFVSGLFPPLPEETTKSTKFSSIAAQFKLQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKSFDEFVQRFTILEPKVLKACPDEMTACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAEVLGISASIIQRRVRTFLCRKVFILLKLSAIELQRVARGLLARHQYECMRREAASMKIQKDFRMYISRNAYKTIYAKAVCIQTGMRGMAARNDLRFKRRTKASIRIQGHYRGYSARTYFKKLKKSTIATQCSWRRTLARRELRKLKMAARESKALEAAKNNLEKQVKELILSLETEQRLREAETQENEKLQHALQEMEVQLQETKAVHIQENEKLQHALQEMEVQLQETKAVHNQENEKLQHALQEMEIQFQETKAVHIQETEKLQHALQEMELQFQETKAALIQEREAANKVVEQTPTIQENSVNVVDSELINKLTAENEQLKELVNSSEKKTVQEFPVNVSDNELINKLTSENEHLKELVNSLEKKTVQEFPVVSDNELINKLTSENEHLKELINSLEKRTGQEFPVNVTDNEMINKHTTENETYKDQVSSLEKKIDETERKYEESNRLSEERMNQIIETESKMIEIKTNMQRLEEKLSDMETENQVLRQQTLLSSSSKRMSGSFSPATTAPPLENGHQVAASQGSIPAKTFGLEDTKQRRSLMERHQESVDALFSCVTKDLGFCEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQLIGSQIEDPDKNDCMAYWLSNTSSLFFHLQRCLRVPTARKPPTPTSFFGRMTQGFRSSNSLSSSAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIVRENFKKDLSPLLSSCIQVDRTSNDNSLWLGINECLNKYLKILKENYVPQVLVQKLYNQIFQYINVELFNSLLLHRECCTLENGEYIKSGLAELEQWCGEATEEYVGSALDELKHATQAVKFLVAEQKDGLSYDDLTNDVCPVLSAQQLYRICTLYCGDNDDNKQNVSPDVTSRLKLLMTDAEEDDKSFLLEDNTSHPIIVEEIPSSAQDKTIPKITPPAELLENANFQFLHDY 1684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1240g00012 1684 Pfam DIL domain 1506 1606 IPR002710 -
Mupr1240g00012 1684 Gene3D Myosin VI head, motor domain, U50 subdomain 349 470 - -
Mupr1240g00012 1684 PRINTS Myosin heavy chain signature 211 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 PRINTS Myosin heavy chain signature 107 126 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 PRINTS Myosin heavy chain signature 517 545 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 PRINTS Myosin heavy chain signature 464 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 PRINTS Myosin heavy chain signature 164 189 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 ProSiteProfiles IQ motif profile. 831 858 IPR000048 GO:0005515
Mupr1240g00012 1684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 808 905 IPR027417 -
Mupr1240g00012 1684 Coils Coil 900 1012 - -
Mupr1240g00012 1684 Gene3D - 690 753 - -
Mupr1240g00012 1684 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 23 72 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 Gene3D Kinesin motor domain 617 689 IPR036961 -
Mupr1240g00012 1684 SMART MYSc_2a 71 756 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 PANTHER MYOSIN 1184 1619 - -
Mupr1240g00012 1684 Coils Coil 1068 1088 - -
Mupr1240g00012 1684 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Mupr1240g00012 1684 SMART DIL_2 1505 1613 IPR002710 -
Mupr1240g00012 1684 Coils Coil 1137 1157 - -
Mupr1240g00012 1684 SMART iq_5 876 898 IPR000048 GO:0005515
Mupr1240g00012 1684 SMART iq_5 828 850 IPR000048 GO:0005515
Mupr1240g00012 1684 SMART iq_5 780 802 IPR000048 GO:0005515
Mupr1240g00012 1684 SMART iq_5 853 875 IPR000048 GO:0005515
Mupr1240g00012 1684 SMART iq_5 805 827 IPR000048 GO:0005515
Mupr1240g00012 1684 SMART iq_5 757 779 IPR000048 GO:0005515
Mupr1240g00012 1684 Gene3D - 856 905 - -
Mupr1240g00012 1684 Gene3D - 760 807 - -
Mupr1240g00012 1684 Gene3D - 808 855 - -
Mupr1240g00012 1684 ProSiteProfiles IQ motif profile. 781 810 IPR000048 GO:0005515
Mupr1240g00012 1684 ProSiteProfiles IQ motif profile. 806 832 IPR000048 GO:0005515
Mupr1240g00012 1684 CDD MyosinXI_CBD 1302 1652 IPR037975 GO:0007015
Mupr1240g00012 1684 Pfam Myosin N-terminal SH3-like domain 25 63 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 Coils Coil 1017 1044 - -
Mupr1240g00012 1684 Coils Coil 1103 1123 - -
Mupr1240g00012 1684 CDD MYSc_Myo11 91 743 IPR036018 -
Mupr1240g00012 1684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 808 IPR027417 -
Mupr1240g00012 1684 ProSiteProfiles Dilute domain profile. 1351 1631 IPR002710 -
Mupr1240g00012 1684 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Mupr1240g00012 1684 Pfam IQ calmodulin-binding motif 855 875 IPR000048 GO:0005515
Mupr1240g00012 1684 Pfam IQ calmodulin-binding motif 879 898 IPR000048 GO:0005515
Mupr1240g00012 1684 Pfam IQ calmodulin-binding motif 808 827 IPR000048 GO:0005515
Mupr1240g00012 1684 Pfam IQ calmodulin-binding motif 784 801 IPR000048 GO:0005515
Mupr1240g00012 1684 Gene3D Kinesin motor domain 43 348 IPR036961 -
Mupr1240g00012 1684 FunFam unconventional myosin-Va 856 904 - -
Mupr1240g00012 1684 Pfam Myosin head (motor domain) 79 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr1240g00012 1684 Coils Coil 1172 1248 - -
Mupr1240g00012 1684 FunFam Myosin 2 345 464 - -
Mupr1240g00012 1684 ProSiteProfiles IQ motif profile. 877 906 IPR000048 GO:0005515
Mupr1240g00012 1684 MobiDBLite consensus disorder prediction 1250 1271 - -
Mupr1240g00012 1684 Gene3D - 473 615 - -
Mupr1240g00012 1684 ProSiteProfiles Myosin motor domain profile. 77 755 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1240g00012 Mupr-Chr1240 68049 90689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1240g00012 1468 1683 Myosins gene family AT1G04600 53.425 4.40e-61 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1240g00012 K10357 - gmx:100791031 2622.42