Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12409g00004 ATGGCCACTTATGCCACTACCACCTTGCTCCTTCTCCTTGCCATGGCCACTACCACCCTTTGCCTCCAAGAAATGGAGGTGCTCCAAATGGCCCAAATCCATGTTTCTAAGGCCAAGAGTTGGGTTGGCAGCTTGCATGACTTGGAAAGCCTAAGCCTTTCTGATCAACCAAGTGCTATAGCCCTTAGAGATTGTGCCAAGCTCTATGGTGAGAGTGAGTCTCGCCTCTCTCACATGATGTCTCAAGAGAGTTACACCAAAGAAGATGCACTTACATGGGTAAGTGCTTTGATGACAAATCATAGGACTTGTTTGGATGGATTGCAAGAAAAAGGGTATGTTAAAGCTCAGGTTTTGGATAGAAACTTGACCATGTTGCTTAAGCAAGCTCTTGTTTTGTATTCAAAGAATAAAGGCAAAGCTGGCAATGGACCACCTGAGAGAACAATATCCAAAACAGATGATGGGCTTTTAGAATCATGGAGTGCAGAAACCTATAAGACAGACTTCACAGTGGCACAGGATGGTTCAGGGACCCACAGAACAATCCAAGCAGCAGTAAATGCACTAGCTTCAATGGGGCACAACCTCCCTGAAAGAGCAGTCATACATGTAAAATCAGGGGTCTATAATGAGAAGGTGGAAATTGGACACAAACTGCCTAATGTGATGTTTGTAGGAGATGGCATAGACAAAACTATCATCACTGGCAACAGAAATGTTGCTCAAGGTTCTTCCACTCTCAGCTCAGCCACATTTGATGTATCAGGGGATGGATTTTGGGCTAGAGATATGACATTTGAGAACACAGCAGGACCAGAACAATACCAAGCGGTGGCACTGAAGGTGAGTTCAGACTTATCAGTTTTCTACAGATGCAGTTTCAGAGGCTACCAAGACACTCTCTATGTCCATTCAAATCGGCAATTCTACCGTGACTGTCACATATACGGCACCATAGATTTCATCTTCGGAGATGCCACAGCAGTGCTACAGAACTGTGACATCATGGTGAGGAAGCCAATGAGCCGCCAATCGAACTTCATCACTGCACAGGGAAGAGATGACCCCAACAAGAACACCGGGATTTCAATCCAAAGTTGCAGGGTTAGGCCTGCATCTGACTTCCTCACACCCAAGGATTCTTACAACACATTCCTTGGTAGGCCTTGGAGGAAGTACTCAAGGACTGTGTTTCTAAAATGTGATTTGGATGGATTCATTCACCCTAGAGGGTGGAGTGAATGGAGTGGAGACTTTGCACTCTCTACTTTGTACTATGGAGAGTACATGAACATAGGAAATGGTGCATCTACACAACATAGGGTCAATTGGCCTGGCTTCCATGTGCTTACCACTGCTACTGAGGCATCGCCCTTCACAGTTACTCACTTTCTGCAAGGAGAAAGGTGGCTTCCACCTACGGGGGTGCCATTTTCCTCT 1443 0.4574 MATYATTTLLLLLAMATTTLCLQEMEVLQMAQIHVSKAKSWVGSLHDLESLSLSDQPSAIALRDCAKLYGESESRLSHMMSQESYTKEDALTWVSALMTNHRTCLDGLQEKGYVKAQVLDRNLTMLLKQALVLYSKNKGKAGNGPPERTISKTDDGLLESWSAETYKTDFTVAQDGSGTHRTIQAAVNALASMGHNLPERAVIHVKSGVYNEKVEIGHKLPNVMFVGDGIDKTIITGNRNVAQGSSTLSSATFDVSGDGFWARDMTFENTAGPEQYQAVALKVSSDLSVFYRCSFRGYQDTLYVHSNRQFYRDCHIYGTIDFIFGDATAVLQNCDIMVRKPMSRQSNFITAQGRDDPNKNTGISIQSCRVRPASDFLTPKDSYNTFLGRPWRKYSRTVFLKCDLDGFIHPRGWSEWSGDFALSTLYYGEYMNIGNGASTQHRVNWPGFHVLTTATEASPFTVTHFLQGERWLPPTGVPFSS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12409g00004 481 PANTHER PECTINESTERASE 35 473 - -
Mupr12409g00004 481 FunFam Pectinesterase 163 481 - -
Mupr12409g00004 481 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 136 IPR035513 -
Mupr12409g00004 481 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 125 IPR035513 -
Mupr12409g00004 481 CDD PMEI-like_4 25 137 - -
Mupr12409g00004 481 Pfam Plant invertase/pectin methylesterase inhibitor 29 131 IPR006501 GO:0004857
Mupr12409g00004 481 ProSitePatterns Pectinesterase signature 2. 316 325 IPR033131 -
Mupr12409g00004 481 SMART PMEI_2 5 133 IPR006501 GO:0004857
Mupr12409g00004 481 Pfam Pectinesterase 169 469 IPR000070 GO:0030599|GO:0042545
Mupr12409g00004 481 Gene3D - 163 481 IPR012334 -
Mupr12409g00004 481 SUPERFAMILY Pectin lyase-like 165 480 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12409g00004 Mupr-Chr12409 12392 15333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12409g00004 6 481 Carbohydrate Esterase AT3G60730 53.557 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12409g00004 K01051 - gmx:100792852 782.326