Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12402g00002 ATGGGTATTGAAGCAATGCCTAGAGCGATTTCGTTTCTGGTTCAACCGCGATGCCTCGTTCTCTTCCTTGTTCTCTCAATTCTCTTGATTCTCGCAATATCTGGTTCGAAATGGGTATGCCTCTTTTCTTTGTTTACTATTTGCGTTGTCGATTTGATTCAGATAATTGAACTGATTTCAACCAAATTGTTTGATCTGTCAATAAATCCGGCACGAGAGAAAGAAGTACAGCCTGAAATTACAGACAGGGTATTCTTGGATGTTGATATTGATGGACAACGTTTAGGTAGGATCGTCATTGGATTATATGGCCAAGTTGTACCAAAAACTGTGGGTGAGAAAGGAAAGAGTGCCAATGATGTAAAACTTCATTACAAAGGAACACCATTTCATAGGATAGTATCAGGTTTCATGATTCAGGGTGGAGACATTGTTCATCATGATGGAAGAGGATATGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAAATAAAACATTTACATGCTGGTGTAGTCTCTATGGTGAATTCAGGTCCTGATTCCAATGGCTCACAGTTAGATGGAGAACATGTTGTGTTTGGCAAGGTTGTGCAAGGCATGGATACTGTGTTTGCAATGGAAGGGGGTGCTGGAACCTACAACGGGAAGCCGAGAAAGAAGGTAGTGATTGCAGACTCTGGAGAATGGAGAGATACCCAAGAGCCAGCGGGA 720 0.4153 MGIEAMPRAISFLVQPRCLVLFLVLSILLILAISGSKWVCLFSLFTICVVDLIQIIELISTKLFDLSINPAREKEVQPEITDRVFLDVDIDGQRLGRIVIGLYGQVVPKTVGEKGKSANDVKLHYKGTPFHRIVSGFMIQGGDIVHHDGRGYESIYGGTFPDENFKIKHLHAGVVSMVNSGPDSNGSQLDGEHVVFGKVVQGMDTVFAMEGGAGTYNGKPRKKVVIADSGEWRDTQEPAG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12402g00002 240 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 88 229 IPR002130 GO:0000413|GO:0003755
Mupr12402g00002 240 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 125 142 IPR020892 GO:0003755|GO:0006457
Mupr12402g00002 240 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 117 IPR002130 GO:0000413|GO:0003755
Mupr12402g00002 240 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Mupr12402g00002 240 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 142 IPR002130 GO:0000413|GO:0003755
Mupr12402g00002 240 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 85 231 IPR002130 GO:0000413|GO:0003755
Mupr12402g00002 240 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 83 231 - -
Mupr12402g00002 240 SUPERFAMILY Cyclophilin-like 77 234 IPR029000 -
Mupr12402g00002 240 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 76 232 - -
Mupr12402g00002 240 Gene3D - 70 238 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12402g00002 Mupr-Chr12402 14587 19263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12402g00002 62 229 U-box Gene Family AT5G67530 34.595 1.11e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12402g00002 - - gmx:100808240 313.923