Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr123g00001 TGCTTACATATGTCCCTGTTGTTGATGGTTTATTTTGTGATTGAACAGATGCAAATCTTCGTGAAAACTTTGACCGGCAAGACCATCACCCTTGAGGTGGAGAGCTCAGACACCATTGACAACGTTAAAGCCAAGATTCAGGACAAAGAGGGTATCCCTCCGGATCAGCAAAGGCTGATTTTCGCTGGTAAACAACTAGAGGACGGAAGAACCCTCGCCGATTACAACATTCAGAAGGAGTCCACCCTCCACTTGGTGCTTCGTTTGAGAGGTGGTATGCAAATCTTTGTCAAGACTTTAACAGGAAAGACCATCACCTTGGAGCTTGAAGATGGAAGAACGCTTGCTGATTATAACATCCAGAAGGAGTCTACCCTGCACTTGGTTTTGCGGCTTCGTGGTGGAATGCAAATTTTTGTCAAGACTTTGACCGGAAAGACCATAACCTTGGAGGTTGAAAGTTCTGATACCATTGATAATGTGAAGGCTAAAATACAGGATAAGGAGGGCATCCCACCAGACCAGCAGAGGCTTATCTTTGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCCGATTACAATATCCAAAAGGAATCCACTCTCCACCTTGTGCTTCGTTTGAGAGGTGGCATGCAAATCTTT 645 0.4512 CLHMSLLLMVYFVIEQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLELEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr123g00001 215 ProSitePatterns Ubiquitin domain signature. 162 187 IPR019954 -
Mupr123g00001 215 PANTHER UBIQUITIN 109 137 - -
Mupr123g00001 215 CDD Ubl_ubiquitin 136 211 - -
Mupr123g00001 215 ProSiteProfiles Ubiquitin domain profile. 109 135 IPR000626 GO:0005515
Mupr123g00001 215 SUPERFAMILY Ubiquitin-like 92 135 IPR029071 -
Mupr123g00001 215 ProSitePatterns Ubiquitin domain signature. 43 68 IPR019954 -
Mupr123g00001 215 Gene3D - 136 214 - -
Mupr123g00001 215 Gene3D - 107 135 - -
Mupr123g00001 215 Gene3D - 13 94 - -
Mupr123g00001 215 Pfam Ubiquitin family 138 209 IPR000626 GO:0005515
Mupr123g00001 215 Pfam Ubiquitin family 108 133 IPR000626 GO:0005515
Mupr123g00001 215 Pfam Ubiquitin family 19 90 IPR000626 GO:0005515
Mupr123g00001 215 SMART ubq_7 17 88 IPR000626 GO:0005515
Mupr123g00001 215 SMART ubq_7 93 131 IPR000626 GO:0005515
Mupr123g00001 215 SMART ubq_7 136 207 IPR000626 GO:0005515
Mupr123g00001 215 CDD Ubl_ubiquitin 17 92 - -
Mupr123g00001 215 SUPERFAMILY Ubiquitin-like 135 211 IPR029071 -
Mupr123g00001 215 FunFam Polyubiquitin 3 17 92 - -
Mupr123g00001 215 PRINTS Ubiquitin signature 69 90 IPR019956 -
Mupr123g00001 215 PRINTS Ubiquitin signature 48 68 IPR019956 -
Mupr123g00001 215 PRINTS Ubiquitin signature 27 47 IPR019956 -
Mupr123g00001 215 FunFam Polyubiquitin 3 136 211 - -
Mupr123g00001 215 ProSiteProfiles Ubiquitin domain profile. 136 211 IPR000626 GO:0005515
Mupr123g00001 215 SUPERFAMILY Ubiquitin-like 12 92 IPR029071 -
Mupr123g00001 215 ProSiteProfiles Ubiquitin domain profile. 17 92 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr123g00001 Mupr-Chr123 7 712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr123g00001 17 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 98.701 9.04e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr123g00001 - K08770 ccin:107264415 359.762