Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12398g00001 ATGAGTGACTCCCTATCGGAGTGGAAGATGAGTTTCTTTTCATGTTGCACGTCACAAGAGAAGATCAACAAGAACTCATTGAAAAGGAGGAGTAAGGACTACCATCACGCAAAGTCTATCCCATCATTTGCCAGCATCTGTTTTAAAACTGATAGCAGCAAGCGGAAGTACATAGAAGAAGAAATAGCAAAAATTGGAAAAGGGAATATTACCTCACAGATTTTTTCTTATCATGAGCTATGTGTTGCAACTCGGAACTTTCACCCTGATAATATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCATTAAAAGCACAAATCAGGTTGTTGCTGTGAAGCAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAATCTTGTCAATTTGGTAGGGTATTGCGCAGATGGTGAACAAAGGATTTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTCCGAACAGAAAGCCTTTGGACTGGCGTACTAGAATGAACATTGCAGCAGGTGCAGCTAAAGGACTTGAATACTTACATGAAGTAGCAAATCCACCAGTGATATACCGGGATTTCAAAGCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACTCACGTATCCACCAGGGTCATGGGAACTTATGGCTACTGTGCACCTGAGTATGCCTCAACAGGTCAATTAACTACAAAATCAGACATATACAGCTTTGGAGTAGTGTTTCTAGAGTTGATCACAGGAAGAAGAGTAATTGATCAGTCAAGACCATCTGAAGAGCAAAACTTAGTCACTTGGGCACAACCACTGTTCAAAGACAGAAGGAAATTTACATCAATGGTTGATCCATTGCTAAAAGGGAACTACCCAGCAAAGGCTCTACACCAAGCATTAGCAGTTGCAGCAATGTGCCTTCAGGAGGAAGCTGATACCCGACCTTTGATTAGTGATGTAGTTACAGCTCTTGACGTTTTAGCCATGAAGCATGCACAAGTGGGTAAACAACAACGCAGGAAAGAGACTTTTTATGAGGACGGGGGATGCAGTTGA 1167 0.4147 MSDSLSEWKMSFFSCCTSQEKINKNSLKRRSKDYHHAKSIPSFASICFKTDSSKRKYIEEEIAKIGKGNITSQIFSYHELCVATRNFHPDNMIGEGGFGRVYKGRIKSTNQVVAVKQLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPPNRKPLDWRTRMNIAAGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLELITGRRVIDQSRPSEEQNLVTWAQPLFKDRRKFTSMVDPLLKGNYPAKALHQALAVAAMCLQEEADTRPLISDVVTALDVLAMKHAQVGKQQRRKETFYEDGGCS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12398g00001 388 Gene3D Transferase(Phosphotransferase) domain 1 164 385 - -
Mupr12398g00001 388 PANTHER OS07G0668900 PROTEIN 29 372 - -
Mupr12398g00001 388 ProSiteProfiles Protein kinase domain profile. 87 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12398g00001 388 FunFam Serine/threonine-protein kinase CDL1-like 58 163 - -
Mupr12398g00001 388 SUPERFAMILY Protein kinase-like (PK-like) 71 359 IPR011009 -
Mupr12398g00001 388 Pfam Protein kinase domain 88 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12398g00001 388 CDD STKc_IRAK 93 362 - -
Mupr12398g00001 388 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Mupr12398g00001 388 FunFam Serine/threonine-protein kinase PBS1 164 380 - -
Mupr12398g00001 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Mupr12398g00001 388 Gene3D Phosphorylase Kinase; domain 1 58 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12398g00001 Mupr-Chr12398 640 3677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12398g00001 69 365 Glycoside Hydrolase AT3G07070 72.391 2.17e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mupr12398g00001 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12398g00001 - - gmx:100798032 710.679