Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1238g00005 ATGGGCAACTGTTGCTCAGGTGGCACGAATGACCCCGACAACAAGGGAGAAAGCAACAACAATGAGGGTGGAGGTGGAAATGCAACCACCCCTCCAGGCCCAGCACCCACCAAGCCTCATAAGCAGTCCAAGCCTGCACCCATCGGCCCAGTGCTTGGGAGGCCCATGGAAGACGTGAGGGGAACCTACAGCATGGGGAAAGAGCTTGGGAGAGGGCAGTTTGGCGTCACCCATTTGTGCACACACAAGACCACGGGGCAGCAGTATGCTTGCAAAACCATTGCCAAGAGGAAGCTTGTCAACAAGGAGGACATTGAAGACGTCAAGAGGGAGGTCCAGATCATGCACCATCTCTCTGGCCAGCCTAACATTGTCGACCTTGTCAACGTCTATGAGGACAAACAATCTGTTCATCTCGTTATGGAACTTTGTGCAGGTGGTGAGCTCTTTGATCGCATCATTGCCAAGGGACACTATACCGAACGTGCTGCTGCTTCCTTGCTCCGTACCATTGTCCAGATTGTCCACACCTGCCACTCCATGGGGGTCATTCATCGTGATCTTAAGCCCGAGAATTTCCTTCTCTTGAACAAGGATGAGAATGCTCCCCTCAAGGCCACCGATTTCGGTCTCTCTGTTTTCTACAAGCAAGGTCTGTCATTTTTCACTTTCTTTTTTTTTCTATACCATCCTCTCATTAACACCCCACCCCATCCCCTTTTCCCAGGCGAGGTCTTCAAAGACATTGTTGGTAGTGCATATTACATTGCCCCTGAGGTCTTGAAGAGAAAATATGGTCCTGAAGTTGATATTTGGAGTATTGGTGTCATGTTATACATTCTTCTCTGTGGTGTTCCTCCATTTTGGGCAGAATCCGAAAATGGGATATTCAACGCAATCCTTCGAGCCCATATTGACTTTAACAGCGATCCGTGGCCATCCATTTCCCCTGCAGCCAAAGATCTTGTAAGGAAAATGTTGAATTCAGATCCCAGGCAGAGGCTCACGGCCTACGAAGTTCTCAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATACACCTCTTGACAACGCGGTGCTCAATAGGCTCAAACAGTTTAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTCATTGCGGGTTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAGGGGCATGGACACCGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGCCTTGCAAAACAAGGGACTAAGCTAACAGAGCAGGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGAACCATTGATTACGATGAATTCATTACAGCGACAATGCACATGAACCGAATGAACAAAGAAGATCATCTTTATACTGCCTTCCAGTACTTCGATAAAGATAACAGCGGGTACATTACCATTGAAGAACTAGAGCAGGCTCTCCACGAGTTTAACATGCACGACGGCAGGGACATGAAGGAAATCATTTCAGAAATTGATGCAGATAATGATGGCCGGATTAACTACGATGAGTTTGCTGCAATGATGAACAAAGGGAACCTAGAAATTAATACCAAGAAGAGGCGCGATTCATCATTATATTAG 1632 0.4706 MGNCCSGGTNDPDNKGESNNNEGGGGNATTPPGPAPTKPHKQSKPAPIGPVLGRPMEDVRGTYSMGKELGRGQFGVTHLCTHKTTGQQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQPNIVDLVNVYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGLSFFTFFFFLYHPLINTPPHPLFPGEVFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESENGIFNAILRAHIDFNSDPWPSISPAAKDLVRKMLNSDPRQRLTAYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNEFKKVALRVIAGCLSEEEIMGLKQMFRGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALHEFNMHDGRDMKEIISEIDADNDGRINYDEFAAMMNKGNLEINTKKRRDSSLY 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1238g00005 543 Pfam Protein kinase domain 63 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1238g00005 543 CDD STKc_CAMK 63 345 - -
Mupr1238g00005 543 ProSiteProfiles Protein kinase domain profile. 63 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1238g00005 543 MobiDBLite consensus disorder prediction 1 58 - -
Mupr1238g00005 543 ProSitePatterns Protein kinases ATP-binding region signature. 69 96 IPR017441 GO:0005524
Mupr1238g00005 543 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Mupr1238g00005 543 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Mupr1238g00005 543 SUPERFAMILY Protein kinase-like (PK-like) 60 347 IPR011009 -
Mupr1238g00005 543 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
Mupr1238g00005 543 ProSiteProfiles EF-hand calcium-binding domain profile. 500 531 IPR002048 GO:0005509
Mupr1238g00005 543 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Mupr1238g00005 543 FunFam Calcium-dependent protein kinase 1 65 148 - -
Mupr1238g00005 543 Gene3D - 358 530 - -
Mupr1238g00005 543 FunFam Calcium-dependent protein kinase SK5 149 358 - -
Mupr1238g00005 543 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Mupr1238g00005 543 SMART serkin_6 63 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1238g00005 543 Gene3D Phosphorylase Kinase; domain 1 65 148 - -
Mupr1238g00005 543 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Mupr1238g00005 543 MobiDBLite consensus disorder prediction 1 27 - -
Mupr1238g00005 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Mupr1238g00005 543 FunFam Calcium-dependent protein kinase 1 354 529 - -
Mupr1238g00005 543 ProSitePatterns EF-hand calcium-binding domain. 509 521 IPR018247 -
Mupr1238g00005 543 SUPERFAMILY EF-hand 386 533 IPR011992 -
Mupr1238g00005 543 SMART efh_1 429 457 IPR002048 GO:0005509
Mupr1238g00005 543 SMART efh_1 500 528 IPR002048 GO:0005509
Mupr1238g00005 543 SMART efh_1 393 421 IPR002048 GO:0005509
Mupr1238g00005 543 SMART efh_1 465 493 IPR002048 GO:0005509
Mupr1238g00005 543 PANTHER SERINE/THREONINE-PROTEIN KINASE 59 521 - -
Mupr1238g00005 543 Pfam EF-hand domain pair 394 454 IPR002048 GO:0005509
Mupr1238g00005 543 Pfam EF-hand domain pair 464 525 IPR002048 GO:0005509
Mupr1238g00005 543 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1238g00005 Mupr-Chr1238 47491 49718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1238g00005 1 542 EF-hand Containing Proteins AT5G12180 76.673 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr1238g00005 Pkinase 7.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1238g00005 K13412 - gmx:100819061 938.717