Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12357g00001 ATGGGTAAGATCATATACTCCAAGAAGTACTTCGATGATACTCATGAATACAGACACGTGGTTCTGCCTCCTGAACTTGCCCAAATGCTTCAGCTTCTCACCCAAACTGAGTGGTGGAGAATTGGGATTCAGCAGAGCAGTGGTTGGGATCATTATGCAATTCATCGCAGTGAACCACACATAATACTTTTCAGGAGGCCTTTGTCGCAGGAAAACCAGACCCATCAAAGCATGCTTCGTAAAATTGAAAATCTGAGAGTGGAAAACAATTAA 273 0.4286 MGKIIYSKKYFDDTHEYRHVVLPPELAQMLQLLTQTEWWRIGIQQSSGWDHYAIHRSEPHIILFRRPLSQENQTHQSMLRKIENLRVENN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12357g00001 90 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 79 - -
Mupr12357g00001 90 Pfam Cyclin-dependent kinase regulatory subunit 4 67 IPR000789 GO:0016538
Mupr12357g00001 90 SUPERFAMILY Cell cycle regulatory proteins 2 73 IPR036858 GO:0016538
Mupr12357g00001 90 Gene3D - 1 74 IPR036858 GO:0016538
Mupr12357g00001 90 Coils Coil 68 88 - -
Mupr12357g00001 90 SMART CKS_2 3 69 IPR000789 GO:0016538
Mupr12357g00001 90 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Mupr12357g00001 90 PRINTS Cyclin-dependent kinase regulatory subunit signature 52 66 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12357g00001 Mupr-Chr12357 2714 3304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12357g00001 1 81 Core Cell Cycle Gene Families AT2G27970 63.095 1.29e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12357g00001 K02219 - gmx:100786340 119.398