Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12354g00003 ATGGAACATAATGCCACAACCATTCCCCCCTTAGAAATTTCCCATACACGACCCCACAGGGTTCGACCAAAAAGCAGCATTCAATTTGATGATACCGTCATCTTACAAGATGACCATGCCAACCTCATCTATGTTGGTGATCCTATCAAGACTAATGAAAAGTATCAGTTTGCCGGGAATGAGATCCGAACCAGCAGATACACTCTTCTCACCTTCCTGCCCAAGAATCTTTTCATCCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCCATTGCTGCTCTCAATCAGCTTCCCCCACTTGCTGTTTTTGGGCGAACTGTGTCCCTTTTCCCCCTCTTGTTCGTGCTTTGTGTCACTGCTATCAAGGATGCCTATGAGGATTGGCGCAGGCACAGGTCGGATCGCAACGAGAACAATCGAGAGTGTCTGGTTCTTCAATCTGCTCAGTTCCACCCCATGACATGGAAAACAATACAGGCTGGTGATGTTGTTAAAATCTTTGCTGATGAGATGATTCCCGCTGACATGGTCTTGTTGGGGACAAGTGATCCGAGTGGGATTGCCTATATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGGTAGGCAGGAAACAGCTTCAGCAGTGTCGCCAGATGCTTGTGCTGTTTCTGGAGTTATTAGATGTGAGCAACCTAATCGGAATATTTATGAGTTCACTGCCAACATGGAGTTCAATGGTTATAAGTTTCCCCTTAACCAGTCAAACATTGTGTTGCGTGGTTGTGTGGTGAAGAACACGAATTGGATAATTGGTGTTGTGGTTTATGCAGGACAACAAACAAAAGCAATGTTGAACAGCGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAAACTTTTTGGTTGTCGGTTTTTCTTTTTATCATGTGCTCAGTTGTGGCCCTTGGGATGGGCCTTTGGCTGGTGCGCCACAAGGAACAGCTTGATACCTTGCCTTACTACAGAAAAACATACTTCAACAATGGGCCAAATAATGGAAAGAAATACAGGTATTATGGGATACCGATGGAAACATTCTTCTCCTTTTTGAGTTCGATTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGGTAGGGGACAAGGATATGTATGATGCTAACTCTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTGTTCTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAGTTTCATAGAGCTAGTGTACATGGAAAGAACTATGGGAGCTCCTTGCTTTCAGAAGATAACAATACAGCAGCAGCCAATAGTGGTAATCGAAGATGGAAACTCAAATCTGAAATTGCTGTTGATTCTGAGCTAATGGCATTGTTGCAGAAAGACTCAAATAGAGATGAAAGAAATGCTGCTCATGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATTATTAGTAGCACATTTTCCAGTTGTGGAGAAGGAGAATCAAATGAAGATGTAGAAGGTATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCTGCCTCTGCATATGGATATACTCTATTTGAACGAACATCTGGAAACCTTGTTGTTGATGTCAATGGGGAGAAACTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTGTTATCCGGTTTCCTGACAATGTTATTAAGGTGTTGGTTAAAGGCGCTGACACTTCAATGTTTAACATTTTAGCACATGACAATGCAGGCAACAATGACATTTGGCATGAAACACAGAGTCATCTAACTGAATATTCTATGCAAGGTTTACGAACTCTTGTACTTGCCTCCAGGGATCTTTCACCTACTGAACTTGAGGAGTGGCAAAGCATGTATGAAGATGCGAGCACTTCATTGATTGATCGTGGTGCAAAACTACGTCAAACAGCGGCTTTTATAGAATCCGACCTAAAGTTACTTGGAGCTACTGGAGTTGAGGATAAGCTGCAGGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAAGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAGTGCAGACATGCAGAAGATAATTATAAATGGCACATCAGAGGTTGAGTGCAAAAATCTCTTGGCTGATGCTAAAGTGAAGTATGGTGTGAGATCTTCAAGTAGAGGACCTCAGAATCTGAAGTGCAAAACTAATTCTAGACATGGTGGCCCTGATATTCCCAACCATAAAAAATCCATAAGCATGCCCAAGGGAAATCCAGGAAAGGAAGAAGGAACTACTGCTCCATTGGCACTCATAATTGATGGAACCAGCTTGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGTCGTGTTGCACCCTTGCAAAAAGCAGGAATTGTTGATCTGATAAAAAGCCGCACAGATGATCTGACATTAGCTATAGGTGATGGGGCAAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAATTCCAATTTTTGAAAAGATTGCTTCTGGTTCATGGGCACTTGAATTATCAACGTATTGGTTACTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGATTGGAGTAGTGTATTATATTCTGTGATATACACATCTATCCCTACTATCATTGTTGGTGTTCTGGACCAAGACTTGAGTCATAGGACACTCTTGCAGAATCCAAAATTGTATGGTGCAGGTCACCGGCACGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGATACACTATGGCAGAGCCTTGTTCTCTTCTACATTCCCCTATTAACCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTTCAGTTGTTATCCTCGTAAATGTACACCTGGCTATGGACATTAACCAATGGGCAGTAGTTACTCACGTGGCTGTATGGGGATCAATAGTCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAACTACGGGACTATTTATCATTTGGCAAGTTCCCCAAGATATTGGATGACAATTTTGCTTATAATAATTATCGCATTGCTACCTCGCTTTTCTTGCAAAGCTGTTTATCAAATCTTTTGTCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGACAATGAGAAAACATCATGATGGTTTCCCGTCA 3462 0.4191 MEHNATTIPPLEISHTRPHRVRPKSSIQFDDTVILQDDHANLIYVGDPIKTNEKYQFAGNEIRTSRYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDRNENNRECLVLQSAQFHPMTWKTIQAGDVVKIFADEMIPADMVLLGTSDPSGIAYIQTMNLDGESNLKTRYGRQETASAVSPDACAVSGVIRCEQPNRNIYEFTANMEFNGYKFPLNQSNIVLRGCVVKNTNWIIGVVVYAGQQTKAMLNSAASPSKRSKLESYMNRETFWLSVFLFIMCSVVALGMGLWLVRHKEQLDTLPYYRKTYFNNGPNNGKKYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMVGDKDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFHRASVHGKNYGSSLLSEDNNTAAANSGNRRWKLKSEIAVDSELMALLQKDSNRDERNAAHEFFLTLAACNTVIPIISSTFSSCGEGESNEDVEGIDYQGESPDEQALVSAASAYGYTLFERTSGNLVVDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVIKVLVKGADTSMFNILAHDNAGNNDIWHETQSHLTEYSMQGLRTLVLASRDLSPTELEEWQSMYEDASTSLIDRGAKLRQTAAFIESDLKLLGATGVEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQKIIINGTSEVECKNLLADAKVKYGVRSSSRGPQNLKCKTNSRHGGPDIPNHKKSISMPKGNPGKEEGTTAPLALIIDGTSLLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHLNYQRIGYLVLYNFYRNAVFVYILCTAFSTTSALTDWSSVLYSVIYTSIPTIIVGVLDQDLSHRTLLQNPKLYGAGHRHEAYNMQLFWITMIDTLWQSLVLFYIPLLTYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWAVVTHVAVWGSIVITYGCMVVLDSIPVFPNYGTIYHLASSPRYWMTILLIIIIALLPRFSCKAVYQIFCPSDIQIAREAETMRKHHDGFPS 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12354g00003 1154 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1134 IPR032630 -
Mupr12354g00003 1154 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 711 IPR023299 GO:0000166
Mupr12354g00003 1154 SUPERFAMILY HAD-like 417 916 IPR036412 -
Mupr12354g00003 1154 SFLD p-type atpase 414 921 IPR044492 -
Mupr12354g00003 1154 Gene3D - 695 911 IPR023214 -
Mupr12354g00003 1154 FunFam Phospholipid-transporting ATPase 115 285 - -
Mupr12354g00003 1154 Pfam E1-E2 ATPase 141 388 - -
Mupr12354g00003 1154 SFLD Haloacid Dehalogenase 414 921 - -
Mupr12354g00003 1154 MobiDBLite consensus disorder prediction 777 816 - -
Mupr12354g00003 1154 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 46 1144 - -
Mupr12354g00003 1154 NCBIfam HAD-IC family P-type ATPase 363 455 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12354g00003 1154 NCBIfam HAD-IC family P-type ATPase 841 960 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12354g00003 1154 NCBIfam HAD-IC family P-type ATPase 690 746 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12354g00003 1154 Gene3D - 115 286 - -
Mupr12354g00003 1154 Gene3D - 542 677 IPR023299 GO:0000166
Mupr12354g00003 1154 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1132 IPR023298 -
Mupr12354g00003 1154 CDD P-type_ATPase_APLT_Dnf-like 59 1026 - -
Mupr12354g00003 1154 Pfam Phospholipid-translocating ATPase N-terminal 44 108 IPR032631 -
Mupr12354g00003 1154 Pfam haloacid dehalogenase-like hydrolase 426 744 - -
Mupr12354g00003 1154 NCBIfam phospholipid-translocating P-type ATPase 57 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mupr12354g00003 1154 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Mupr12354g00003 1154 SUPERFAMILY Calcium ATPase, transduction domain A 140 282 IPR008250 -
Mupr12354g00003 1154 Gene3D - 440 477 IPR023299 GO:0000166
Mupr12354g00003 1154 FunFam Phospholipid-transporting ATPase 541 685 - -
Mupr12354g00003 1154 Gene3D - 427 439 IPR023214 -
Mupr12354g00003 1154 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Mupr12354g00003 1154 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Mupr12354g00003 1154 Gene3D - 413 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12354g00003 Mupr-Chr12354 13820 19983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12354g00003 35 1153 Primary Pumps ATPases AT5G04930 54.049 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12354g00003 K14802 - gmx:100788740 2040.39