Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12347g00001 ATGGCATTGGAGTGCAGTTTCCACTTCCTAAATGGGGTTTACATGGTGCTATTGTTTTGCCTTGGCATTGTCCTTGTGAATTCGGTTAACGAAGAGGGGTCAAGTCTTTTGGGGTTCAGAACTTCCCTTCTTGACCCTAACAACAATCTATATAACTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTCTTGCACGGGTTCAGTGGTAACTTCAGTTAAACTTTACAAACTCAATCTCTCTGGTACTTTGGCTCCTACCATATGTAATCTCCCAAACCTGCTTGAGTTGAACTTGTCAAAAAATTTCATCTCTGGCCCCATTCCTGATGGTTTTGTTGACTGTGCTGGTTTGGAGGTTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTCACTACCCCTATTTGGAAAATAACAACACTTAAAAAGCTTTACCTGTGTGAAAACTACATGTATGGTGAAGTGCCAGTGGAGCTTGGGAATTTGGAATCACTTGAGGAGCTGGTCATATATAGCAATAATTTAACTGGAAGAATTCCCTCATCAATAAGAAATTTGAAGCAGCTTAGGGTTATAAGGGCAGGTCTGAATGCCCTCTCAGGGCCAATCCCTGGTGAAATTAGTGAGTGTGAGAGCTTGGAGATATTGGGATTGGCACAAAATCAGCTAGAAGGTTCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACCACTATACTTCTGTGGCAAAACTCTCTATCTGGGGAGATTCCTCCTGAGATTGGCAACATTAGTAGCTTGGAACTTCTTGCCTTGCACCAAAACTCCTTAAGTGGTGGTGTCCCCAGGGAACTGGGAAAGCTTTCCCAGTTGAAGAGGTTGTACATGTACACCAACCAGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAATGCCATTGAGATAGACCTTTCTGAGAACCATTTGATTGGGTTCATTCCCAAGGAGTTGGGCCTGATCTCTAATCTCAGCTTGCTTCATCTGTTTGAAAACCACCTGCAGGGCCATATTCCAAGGGAGCTTGGTCAGTTGAGGGTGCTAAGAAATTTAGACCTGTCACTGAATAACTTGACAGGTACAATTCCACTTGAGTTTCAAAACCTCACATACATGGAGGATTTGCAGCTGTTTGACAACCAACTTGATGGTGTGATTCCTCCTCATCTTGGAGCTGTTAGAAACCTCACTATCCTTGATATATCTGCAAATAACCTTGTTGGTATGATACCTTTCCATCTCTGTGAGTATCAGAAGCTGCAGTTCCTGAGCCTTGGGTCAAATAGGTTGTTTGGAAATATTCCTTATAGCCTCAAAACATGCAAATCTCTTGTGCAGCTTATGCTGGGGGATAATCAGTTGACAGGAAGTTTACCTGTGGAATTGTATGAACTTCACAATCTCACTGCACTTGAACTCTATCAAAACCGGTTTTCTGGGATAATAAACCCGGGGATAGGCCAACTCAGGAATCTAGAGAGGCTTCTCCTGTCAGCTAACTACTTCGAAGGCCTTCTCCCTCCTGAGATTGGAAACTTGGCACAACTTGTCACATTCAATGTTTCCTCTAACCGTTTCAGTGGAAGCATTCCTCATGAGTTGGGAAACTGTGGTAGAATGCAGAGGCTTGATCTAAGCAGGAACCACTTCACTGGCATGCTTCCAAATAAAATTGGCAACCTGGTGAACCTGGAACTGTTGAAAGTCTCTGATAACATGCTCTCAGGAGAAATACCAGGCACTTTGGGGAACCTCATTAGGCTCACAGACCTGGAACTAGGTGGCAACCAGTTTTCAGGAAGCATCTCTTTTCACTTGGGAAAACTTGGAGCTCTTCAGATTGCACTTAACCTGAGCCACAACAAACTTTCTGGCTCAATTCCTGATAGCCTTGGGAGCTTGCAAATGCTGGAGGCCCTTTATCTAAATGACAATCAACTTGTTGGTGAGATTCCTGCTTCAATTGGAGACCTTCTCAGTCTTGTAGTGTGCAATGTGTCTAACAACAAGCTGGTAGGGATTGTTCCAGACACCACCACATTTAGAAAGATGGATTTCACAAACTTTGCTGGGAACAATGGCTTGTGTCGTGTCGGTACTAGTCATTGCCATCCAACTGGATCCTCCCATGCTGCAAAACAAAGCTGGATCAGAAATGGTTCAACAAGGGAAAAGATAGTGAGCATTGTTTCTGGGATGGTTGGACTAGTTTCTCTCATTTTCATAGTGTGTATATGTTTGGCCATGAGGCGCCGTAGCCATGATGCTTTTGTTTCACTTGAGGGACAAACAAAGACTCATGTCTTGGATAATTACTACTTTCCTAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACTGGAAATTTTTCAGAAGCTGCAGTTCTTGGAAGAGGAGCTTGTGGAACTGTTTACAAGGCTGTTATGAATGATGGTGAAGTGATTGCTGTCAAGAAGCTGAATTCGCGTGGAGAAGGAACAAATAATGTTGACAGAAGCTTCTTTGCTGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGTATGGATTTTGCTACCATGAGGATTCTAATCTTCTCTTGTATGAGTACATGGAAAATGGAAGCCTTGGGGAACAACTTCATTCAAGTGCAACCACTTGTGCTTTGGATTGGGGTAGTCGGTATAAAATTGCTCTTGGAGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGTAAGCCTCAAATCATCCATCGTGATATAAAGTCAAACAACATATTACTTGATGAGGTGTTTCAGGCTCACGTTGGAGACTTTGGCTTGGCTAAGTTGATTGATTTTTCCTACTCAAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAAGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGTGATTTAGTGACTTGTGTGAGAAGAGCAATTCAGGCATCAGTACCAACATCTGAATTATTTGACAAGAGATTGAACCTGAGTGCACAAAAGACAGTTGAAGAAATGTCTCTTATTCTCAAAATTGCCCTGTTCTGCACCAGCACATCTCCACTTAATAGGCCTACAATGAGAGAGGTCATTGCAATGCTGATTGATGCTAGAGAATATGTCAGCAACTCACCAACCTCTCCTACATCAGAATCTCCATTGGATGAGGATGATGGCATTTCTTCCAAAGAGCTAGCTTTCCATGTTATTAGTTCCCTGACAACTAATTGGCTTGTCATGGTTTGTGCAGATGGTGGTCTTGAGTTCAGTGTGTTTTGGGAGTCTCATATTCTGATGTGA 3435 0.4303 MALECSFHFLNGVYMVLLFCLGIVLVNSVNEEGSSLLGFRTSLLDPNNNLYNWNSSDLTPCNWTGVSCTGSVVTSVKLYKLNLSGTLAPTICNLPNLLELNLSKNFISGPIPDGFVDCAGLEVLDLCTNRLHGPLLTTPIWKITTLKKLYLCENYMYGEVPVELGNLESLEELVIYSNNLTGRIPSSIRNLKQLRVIRAGLNALSGPIPGEISECESLEILGLAQNQLEGSIPRELQKLQNLTTILLWQNSLSGEIPPEIGNISSLELLALHQNSLSGGVPRELGKLSQLKRLYMYTNQLNGTIPPELGNCTNAIEIDLSENHLIGFIPKELGLISNLSLLHLFENHLQGHIPRELGQLRVLRNLDLSLNNLTGTIPLEFQNLTYMEDLQLFDNQLDGVIPPHLGAVRNLTILDISANNLVGMIPFHLCEYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGDNQLTGSLPVELYELHNLTALELYQNRFSGIINPGIGQLRNLERLLLSANYFEGLLPPEIGNLAQLVTFNVSSNRFSGSIPHELGNCGRMQRLDLSRNHFTGMLPNKIGNLVNLELLKVSDNMLSGEIPGTLGNLIRLTDLELGGNQFSGSISFHLGKLGALQIALNLSHNKLSGSIPDSLGSLQMLEALYLNDNQLVGEIPASIGDLLSLVVCNVSNNKLVGIVPDTTTFRKMDFTNFAGNNGLCRVGTSHCHPTGSSHAAKQSWIRNGSTREKIVSIVSGMVGLVSLIFIVCICLAMRRRSHDAFVSLEGQTKTHVLDNYYFPKEGFTYQDLLEATGNFSEAAVLGRGACGTVYKAVMNDGEVIAVKKLNSRGEGTNNVDRSFFAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSATTCALDWGSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTCVRRAIQASVPTSELFDKRLNLSAQKTVEEMSLILKIALFCTSTSPLNRPTMREVIAMLIDAREYVSNSPTSPTSESPLDEDDGISSKELAFHVISSLTTNWLVMVCADGGLEFSVFWESHILM 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12347g00001 1144 Pfam Protein kinase domain 807 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12347g00001 1144 SUPERFAMILY RNI-like 365 688 - -
Mupr12347g00001 1144 SMART serkin_6 805 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12347g00001 1144 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 331 1080 - -
Mupr12347g00001 1144 SMART LRR_typ_2 479 503 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 359 382 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 527 551 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 167 191 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 94 118 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 648 672 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 575 599 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 287 311 IPR003591 -
Mupr12347g00001 1144 SMART LRR_typ_2 239 263 IPR003591 -
Mupr12347g00001 1144 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 183 280 - -
Mupr12347g00001 1144 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 884 1096 - -
Mupr12347g00001 1144 FunFam Nuclear pore complex protein NUP107 29 182 - -
Mupr12347g00001 1144 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 883 - -
Mupr12347g00001 1144 SUPERFAMILY L domain-like 44 395 - -
Mupr12347g00001 1144 Gene3D Phosphorylase Kinase; domain 1 769 883 - -
Mupr12347g00001 1144 SUPERFAMILY Protein kinase-like (PK-like) 782 1079 IPR011009 -
Mupr12347g00001 1144 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Mupr12347g00001 1144 Gene3D Ribonuclease Inhibitor 386 725 IPR032675 -
Mupr12347g00001 1144 Gene3D Ribonuclease Inhibitor 289 382 IPR032675 -
Mupr12347g00001 1144 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 281 383 - -
Mupr12347g00001 1144 Gene3D Ribonuclease Inhibitor 185 283 IPR032675 -
Mupr12347g00001 1144 Gene3D Transferase(Phosphotransferase) domain 1 884 1097 - -
Mupr12347g00001 1144 ProSiteProfiles Protein kinase domain profile. 805 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12347g00001 1144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Mupr12347g00001 1144 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Mupr12347g00001 1144 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 408 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12347g00001 Mupr-Chr12347 9611 14784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12347g00001 51 1083 Receptor kinase-like Gene Family AT1G73080 37.581 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr12347g00001 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12347g00001 - - gmx:100818311 2019.2