Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12340g00005 ATGGCAACGAAGGTGATGGGGAGGTGGGGCTCCTGGGAGGAGCTCCTCCTTGGTGGGGCCGTTCTCCGCCACGGAACCCGAGACTGGAACGTCGTCGCCGCCGAGCTCCGGGCCCGAACAGTTTGTCCCTACACCATTACTCCTGAGGTTTGTAAAGCTAAATATGATGACTTGCAAAAGCGGTATTCTGGGAGCAAGGCTTGGTTTGAGGAGCTTAGGAAGACTAGAGTAGCAGAGCTGAAGAGAGCTCTGGAGCTATCTGAAGATTCAATTGGGTCTCTTGAATCCAAGCTTGAAAGCCTCAAGGCTGGGAAGAATGAGAAAAGAGATGATTGTCATGTCGATAAAGGATTAGGTCGTCCGAAGGTACATGTAGTTTCACAGAAACTAGAGAGAGTTGAATCTTCCACCAAAGAGACATCGAAGGATGGGCTATCTGCTGGGAGTTTCACACATGAAACCAGGACAAACTGGTCTCCTGAATGTCCAGTTCCAGCTGGTTCTGCTGAAGAAAATATGGAGACTAAGCCAGAGGTTTCGCACTCCACAGAGCAGGTTAATGTTTTGAGTGTAGATAAGTTGGCACACACTATATATGAAGGACAAGGAGGAAGTTGTAAGAAACGGAGAGGGAAGAGGAAGAGGAAGGATTGTGGAAGAAATATGAAGGATGCAAGTGTGGGGGAAAGTGATTTGTTGGATTCGGCTGATGTTGTGTCCTGGTGTAAAGAAAGTTCTACCAGCAACTGTGGTGAAGTTGCCAAATCCTGTGATGTAGATGATCAAATTAGGAACTTGAAAAAGGAGAGGGTGGAAGACATGATGGAGATTTTGGATTCTATTTTTGAAACTAAAGGTGCTTCTGCCTTCCGACGCAGACTCGATAGTCAGAAGAGAGGAAGGTACAAGAAAATGATCCGGCAGCACATGGACTTTGACACTATAAGGTCAAGAATTAGCAGCCAAACAATTAAGTCAAGGGTAGAACTTTTCAGAGACTTGCTCCTACTCACTAACAATGCTTTAGTGTTCTACTCCAAGAGCACTCGAGAGTACAAATCTGCTCTACTTCTAAGAGACATTGTCACAAAAAAAATGAGGGAAAGTTTAAAGGGCACGAGCAACAACAAAGGCACCACCACTGAAGCTACTACTAACGTGCCTATTAAATTACCTGCGCATAATCCTCATGTGAAACCAAGAAGTGTAAGGCCAGGCAACAGAAAAATAGTTGCAAAGGCAGTTGGTGGCAACAACTCTGAAACTAAGAAACCTTGTAAAGTTGATTCTCCATCCTCGGTGGAATCCTTAACTGTCAAGAAGAAAGGTTTTGGTCGACCAAAAAAGCTTGCACGTGGGGCCGCAGGTCAAAGGCCTGCAACACCAATGAAGGGAAAGAAAAGAGTTAGGACAAGGACCAAAAGGAACTAG 1431 0.4549 MATKVMGRWGSWEELLLGGAVLRHGTRDWNVVAAELRARTVCPYTITPEVCKAKYDDLQKRYSGSKAWFEELRKTRVAELKRALELSEDSIGSLESKLESLKAGKNEKRDDCHVDKGLGRPKVHVVSQKLERVESSTKETSKDGLSAGSFTHETRTNWSPECPVPAGSAEENMETKPEVSHSTEQVNVLSVDKLAHTIYEGQGGSCKKRRGKRKRKDCGRNMKDASVGESDLLDSADVVSWCKESSTSNCGEVAKSCDVDDQIRNLKKERVEDMMEILDSIFETKGASAFRRRLDSQKRGRYKKMIRQHMDFDTIRSRISSQTIKSRVELFRDLLLLTNNALVFYSKSTREYKSALLLRDIVTKKMRESLKGTSNNKGTTTEATTNVPIKLPAHNPHVKPRSVRPGNRKIVAKAVGGNNSETKKPCKVDSPSSVESLTVKKKGFGRPKKLARGAAGQRPATPMKGKKRVRTRTKRN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12340g00005 476 Coils Coil 77 97 - -
Mupr12340g00005 476 MobiDBLite consensus disorder prediction 423 437 - -
Mupr12340g00005 476 MobiDBLite consensus disorder prediction 416 476 - -
Mupr12340g00005 476 SMART bromo_6 267 371 IPR001487 GO:0005515
Mupr12340g00005 476 Gene3D - 261 377 IPR036427 GO:0005515
Mupr12340g00005 476 ProSiteProfiles Bromodomain profile. 282 352 IPR001487 GO:0005515
Mupr12340g00005 476 CDD Bromodomain 272 366 - -
Mupr12340g00005 476 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 4 428 - -
Mupr12340g00005 476 MobiDBLite consensus disorder prediction 140 158 - -
Mupr12340g00005 476 Pfam Bromodomain 275 355 IPR001487 GO:0005515
Mupr12340g00005 476 SUPERFAMILY Bromodomain 268 370 IPR036427 GO:0005515
Mupr12340g00005 476 MobiDBLite consensus disorder prediction 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12340g00005 Mupr-Chr12340 58907 63901 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12340g00005 Bromodomain 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12340g00005 - - gmx:100793951 792.341