Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12340g00003 ATGGCACAAAAAACGCTCTGTTTGTCTCTGCTTTTGAGAAGAAAGACAGAAAAAGAAACCAAGAGTGACACACAGTGCTTGTATCTATCTCTACACTGCAATATGGGTAGCACGAAATTGGAGTTGCATGTGGGAATCTTTGCAACCTGCATGGTGATTCTCGTGGGGACTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCTGCAATCAATAGTCTATATGTTTCTCTGGGGTCACCACCACTTCAAGGGTGGAAACCCATGGGAGGAGATCCTTGTTTGGAACTGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCGGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTCCCATCCATTATAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTGCCCCCTACTCTGAGGAGCTTGTCTCTCTTAGGAAATCGGTTAAATGGAAGCATTCCAGATGCCTTGTCCTTATTAACTCAATTGTCAAACTTGGACTTGTCCAATAACAACTTGAGTGGTCAACTGCCTTCCTCAACAGGAAGTTTATCATCTCTTACTACGTTACACTTGCAAAACAATCAACTTTCTGGCACCCTTGATGTGTTGCAAGACCTGCCTCTACAAGATCTGAACATAGAGAACAATTTATTCTCGGGGCCAATTCCTCCAAAATTGTTGAGCATTCCTAATTTCAGTAAAAATGGGAATCCATTTAATACTACTATTATTCCATCACCTGCTGCGGCTCCTGCACCCATAGCTATGGCTTCATCTCCCCAAGAATCACCTTGGAAGGTGGCATATGGTCCTTCTGCCCTGACAGCACCAGTGCCTGCAAGTACTAGGAAGTCTTTTATAGCTAAGAGCATCATTTGGATTGCTGGTGCTGGTTTTTTAGTATTCATTGTATTAGGAGTTTGTCTTATAATGTTGCGGTGTGTTAAGAGAAGGCCAGAGAAGAAAAATGCTAAGAAACTTGATGATGTGGATGTGTTTGCGGGACCTTTGAATAAACCTACATGCAGTGACTCTGTATTTGAAGCAACTAATCAAGAGGAGAAAGGTAAATGTGAAGTACCAAATAGAAGAACAAATTTGATTCCAAAGGTTCAGGATGAACAAGACATATATGTGAAAGTAGTATCTGCAACTTCAGAATGCAATAATGGTCGTGAATCAATCAACACCAGAGGGGGTTCCAGACTTTCATCCCTGCAGCCACCACCACAACACTTTCTCCCAGCCATTCCTGGTGAGAAGGTCATTATCAATCCGGCTATAACTATCCAAGTAACTGAAAGACAAGACATGACAAATTCCATCAAAGTTTATACTGTTGCATTGCTTCAACAATATACAAATAGCTTTTCCCAAGAAAACTGTATTGGGGAAGGTACACTTGGGCCTGTTTATCGGGCTGAGTTCCCTGATGGCAAGCTATTGGCAGTGAGGAAACTGGATGGTACTGCTTCCATGGGGCAGAGTCATGAACAGTTTCTTCAATTGGTGTCCAGCATCTCAAAAATTCAGCATGCAAATATTGCAAGGCTTGTAGGATACTGTGCTGAGCATAACCAACGACTACTTGTATATGAGTATTGCAGTAATGGGACCCTACATGATGCACTGCATGGGGATGATGATCACCGTATCAAACTTCCATGGAATGCACGCATTCAGGTGGCACTTGGAGCCGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTTCTGAATGACAATTTGGAAGTGTTCATCTCTGATTGTGGATTAGGACCATTACTATCTTCTGGGTCTACTGGGAAGTTATCAGGACGCCTCCTTACAGCTTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGACGTCTTCAGTTTTGGTGTCGTAATGCTAGAACTCCTCACTGGACGAAAATCATATGACAAGTCACGGCCTCGTGGAGAACAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAATGGAGCCTATTCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTGTACAGCGTGAACCTGAATTCCGGCCGGCAATGTCGGAAGTTGTTCAAGATCTCATGCGAATGATGTAA 2253 0.4288 MAQKTLCLSLLLRRKTEKETKSDTQCLYLSLHCNMGSTKLELHVGIFATCMVILVGTFCVGDTDMVDVAAINSLYVSLGSPPLQGWKPMGGDPCLELWQGVACVFSNITAIHLGGMNLGGQLGSNLNFPSIIELDLSNNHIEGPIPFTLPPTLRSLSLLGNRLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLDVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFSKNGNPFNTTIIPSPAAAPAPIAMASSPQESPWKVAYGPSALTAPVPASTRKSFIAKSIIWIAGAGFLVFIVLGVCLIMLRCVKRRPEKKNAKKLDDVDVFAGPLNKPTCSDSVFEATNQEEKGKCEVPNRRTNLIPKVQDEQDIYVKVVSATSECNNGRESINTRGGSRLSSLQPPPQHFLPAIPGEKVIINPAITIQVTERQDMTNSIKVYTVALLQQYTNSFSQENCIGEGTLGPVYRAEFPDGKLLAVRKLDGTASMGQSHEQFLQLVSSISKIQHANIARLVGYCAEHNQRLLVYEYCSNGTLHDALHGDDDHRIKLPWNARIQVALGAARALEYLHENFQPPIVHRNFRSANVLLNDNLEVFISDCGLGPLLSSGSTGKLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDKSRPRGEQFLVRWAVPQLHDIDALSKMVDPCLNGAYSMKSLSRFADIVSSCVQREPEFRPAMSEVVQDLMRMM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12340g00003 750 Gene3D Transferase(Phosphotransferase) domain 1 550 750 - -
Mupr12340g00003 750 SUPERFAMILY L domain-like 99 260 - -
Mupr12340g00003 750 Gene3D Ribonuclease Inhibitor 67 264 IPR032675 -
Mupr12340g00003 750 ProSiteProfiles Leucine-rich repeat profile. 200 222 IPR001611 GO:0005515
Mupr12340g00003 750 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 55 748 IPR046959 -
Mupr12340g00003 750 Gene3D Phosphorylase Kinase; domain 1 438 549 - -
Mupr12340g00003 750 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 64 175 - -
Mupr12340g00003 750 ProSiteProfiles Protein kinase domain profile. 472 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12340g00003 750 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 176 265 - -
Mupr12340g00003 750 Pfam Protein tyrosine and serine/threonine kinase 475 746 IPR001245 GO:0004672|GO:0006468
Mupr12340g00003 750 SUPERFAMILY Protein kinase-like (PK-like) 453 746 IPR011009 -
Mupr12340g00003 750 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 550 750 - -
Mupr12340g00003 750 PRINTS Leucine-rich repeat signature 198 211 - -
Mupr12340g00003 750 PRINTS Leucine-rich repeat signature 177 190 - -
Mupr12340g00003 750 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 440 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12340g00003 Mupr-Chr12340 24177 31200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12340g00003 53 750 Strubbelig Receptor Gene Family AT4G03390 50.734 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mupr12340g00003 PK_Tyr_Ser-Thr 4.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12340g00003 - - gmx:100793423 1209.13