Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12338g00001 ATGAGATATTTTTCAGATGAGGGTTCTTACCCTCTTCTGTTTGTTTCTTCAACAGTTGTAGCTCTGATGGCCATAAAGAATGACTTGGTCGATCCTCACAATGTCCTGGAGAATTGGGATATTAATTCTGTTGATCCATGTAGCTGGAGGATGATTACATGTTCTCCAGATGGCTTTGTTTCTGCATTGGGATTGCCTAGTCAGAACTTGTCTGGTATACTGTCTCCTGGGATTGGAAATCTTACCAACTTACAATCTGTGTTGCTTCAGAATAATGCCATTTCCGGTCGGATTCCTGCTGCAATAGGAAACTTAGAAAAGCTTCAGACACTTGATCTTTCCAATAATGCATTTAGTGGTGAGATACCCAGTTCTTTGGGAGGCCTCAAGAACCTGAATTATTTGAGGTTAAACAATAACAGCCTTACAGGATCCTGCCCTCAGTCACTTAGCAACATTGAAGGTCTAACCCTTGTGGACCTCTCCTACAACAATCTGAGTGGTTCCTTGCCAAGAATATCAGCAAGAACATTAAAGATTGTGGGTAACCCTTTGATTTGTGGTCCAAAAGCAAACAACTGTTCTACTGTTTTACCGGAGCCACTTTCCTTCCCTCCAGATGCACTAAGAGCCCAATCAGACTCTGGTAAAAAGAGCCATCATGTGGCACTTGCTTTTGGTGCAAGTTTTGGTGCTGCCTTTGTCATTGTGATTATAGTTGGGTTTCTTGTTTGGTGGCGATATAGACGCAACCAGCAGATATTCTTTGATGTCAATGAGCATTACGATCCGGAGGTGCGGCTTGGTCATTTAAAAAGGTTTTCATTCAAAGAGCTTCGAGCTGCAACAGACCATTTCAACTCAAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCATGCTTGAATGATGGGTCTGTTGTGGCTGTTAAAAGGTTAAAGGACTATAATGCAGCTGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACAATAAGTTTGGCTGTCCACCGGAATCTTCTTAGGCTTTCTGGGTTTTGCAGTACTCAGCACGAGAGGCTCCTCGTTTATCCTTATATGTCTAATGGCAGTGTAGCCTCTAGATTGAAAGATCATACTCATGGTCGACCGGCGTTAGATTGGACGAGGCGGAAGAGAATAGCTTTAGGTACAGCAAGAGGGTTGGTTTACTTGCACGAGCAATGTGACCCTAAAATTATTCACCGTGATGTAAAAGCAGCCAACATATTGCTGGATGAAGACTTTGAAGCTGTTGTTGGTGATTTTGGTTTAGCCAAGCTTTTGGATCATAGAGATTCCCATGTGACCACTGCTGTGCGTGGCACTGTTGGTCACATTGCTCCTGAGTACCTATCCACTGGCCAGTCATCAGAAAAGACTGATGTGTTTGGGTTTGGAATCTTGCTGCTTGAACTGATCACAGGTCATAAGGCTCTAGATTTTGGGCGAGCAGCGAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCACCAGGATGGAAGATTAAGTCAAATGGTGGACAAAGACCTAAAGGGCAACTTTGATGTGATTGAATTAGAAGAAATGGTTCAGGTTGCACTCTTGTGCACACAATTCAATCCTTCACACCGCCCCAAGATGTCAGAAGTATTGAAGATGTTGGAAGGGGATGGGTTAGCCGAGAGATGGGAGGCTTCACAGAGGATTGAAACACCAAGGTTCCGGTCTTGTGAACCTCAAAGATATTCAGATTTAATAGAGGAATCTTCACTCATAGTTGAAGCCATGGAGCTTTCTGGCCCTAGGTTGTGGCATGCTCAGGCTTTGAAGCAACTT 1851 0.436 MRYFSDEGSYPLLFVSSTVVALMAIKNDLVDPHNVLENWDINSVDPCSWRMITCSPDGFVSALGLPSQNLSGILSPGIGNLTNLQSVLLQNNAISGRIPAAIGNLEKLQTLDLSNNAFSGEIPSSLGGLKNLNYLRLNNNSLTGSCPQSLSNIEGLTLVDLSYNNLSGSLPRISARTLKIVGNPLICGPKANNCSTVLPEPLSFPPDALRAQSDSGKKSHHVALAFGASFGAAFVIVIIVGFLVWWRYRRNQQIFFDVNEHYDPEVRLGHLKRFSFKELRAATDHFNSKNILGRGGFGIVYKACLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQHERLLVYPYMSNGSVASRLKDHTHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLSQMVDKDLKGNFDVIELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAERWEASQRIETPRFRSCEPQRYSDLIEESSLIVEAMELSGPRLWHAQALKQL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12338g00001 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Mupr12338g00001 617 Gene3D Ribonuclease Inhibitor 17 196 IPR032675 -
Mupr12338g00001 617 FunFam Somatic embryogenesis receptor kinase 1 255 362 - -
Mupr12338g00001 617 FunFam Putative LRR receptor-like serine/threonine-protein kinase 15 196 - -
Mupr12338g00001 617 ProSiteProfiles Protein kinase domain profile. 286 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12338g00001 617 SMART serkin_6 286 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12338g00001 617 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Mupr12338g00001 617 Pfam Protein kinase domain 287 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12338g00001 617 Gene3D Phosphorylase Kinase; domain 1 255 362 - -
Mupr12338g00001 617 Pfam Leucine rich repeat N-terminal domain 21 55 IPR013210 -
Mupr12338g00001 617 SUPERFAMILY Protein kinase-like (PK-like) 262 560 IPR011009 -
Mupr12338g00001 617 Gene3D Transferase(Phosphotransferase) domain 1 363 578 - -
Mupr12338g00001 617 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 570 - -
Mupr12338g00001 617 SUPERFAMILY L domain-like 17 185 - -
Mupr12338g00001 617 FunFam Somatic embryogenesis receptor-like kinase 1 363 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12338g00001 Mupr-Chr12338 5084 9359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12338g00001 51 607 Receptor kinase-like Gene Family AT1G60800 76.761 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mupr12338g00001 Pkinase 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12338g00001 - - gmx:100806943 1141.72