Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12335g00002 ATGGCGACCATAGCAATGAAGACGCAGCCGGACGGTGCCGGCGCCGCCGTACCCAACGTCGGCGAAGGAGGAGAGAAGAAAAGCATAAACCCGGAGCTATGGCAAGCTTGTGCGGGACCGCTTCTCAACCTGCCTTCGCCTGGAACTCACGTCGTTTACTTCCCTCAAGGCCACAGCGAACAGGTCGCAGCGTCTTTGAAGAAAGACGTGGATGCTCAAATTCCGAACTACACCAATCTCCCCTCCAAGATACCGTGTCTTCTTCACAATGTCACATTGCATGCAGATCCAGACACAGATGAAGTATACGCTCAGATGACACTTCAGCCAGTTCCTTCTTTTGACACAGATGCCTTGTTAAGATCAGATATTTCTCTCAGGTCGAGTAAGCCACAACCTGAGTTTTTCTGTAAACAACTGACGGCGAGTGATACGAGTACTCATGGAGGTTTCTCTGTACCCCGCCGTGCTGCAGACAAGATGTTTCCCTCTCTTGATTACTCTCTGCAACCTCCTGCTCAAGAACTTGTGGCCCGGGATTTGCATGATAATGTTTGGAGATTTCGCCATATATATCGTGGACAACCAAAACGTCACTTGCTAACAACTGGATGGAGTCTGTTTGTCAGTGGAAAAAGGCTTTTAGCTGGAGACTCTGTTTTGTTTGTAAGAGATGAAAAGCAGCAGCTTCTTTTGGGTATCAGACGAGCTAATAAAAGGCAACCCTCCAATATATCATCTTCAGTACTATCAAGTGATAGCATGCACATTGGAGTTCTGGCTGCAGCTGCTCATGCTGTTGCAAACAATAGTTCCTTCACTGTGTTTTATAATCCTAGGGCTAGTCCCTCTGAATTCGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTATAGCCACCATATATCACCTGGTATGCGCTTCCGAATGATGTTCGAAACTGAAGACTCAGGAACAAGAAGATATATGGGTACAATTATAGGTGTCAGTGATCTGGATTCTGTGAGATGGAAAAATTCGCTATGGCGTAATTTGCAGGTTGGTTGGGATGAATCAATTGCTGAGGAAAGGCGAAGTAGGGTCTCAGTCTGGGAAATTGAACCTGTGACTGCTCCATATTTCATCTGCCCACCTCCTTTCTTCAGATCTAAGAGGCCTAGACTACCGGGAATGCCAGATGATGAGTCTGATTTTAATAACCTTTTCAAGAGTGCTGTTCCTTGGCTTGGTGATGATATGTGCATAAAGGATCCCCAAGCTCTTCCTGGCTTGAGCTTAGTTCAATGGATGAACATACAGCAAAATCCTGCTCTGGCTAGCTCGGTGCAACCAAATTATGTGCCTTCCATGTCTGGATTGATTCTGCAAAATCATCCTGGTGCAGATATTACAAATCAGCTGGGGTTTTCTACTCCACAAATCTCTCAATCAAACGATGTCTCTGTCAATGCTCAAAATATACTTCAGACTTCCCAGCAACTTGATCACATTCAGAAGCTACCATCCACATCCAGTGCATTAGGAATGGTCACGCAGCCACTGCAGCAATTGGGTGATATCACTCAACAACCGAGGAACATGACAAATCAAACTTTACCACAGAATCAAGTTCACACCCAACTTCTGAATCCCCAGAGTCTTGTCCTAACTAACAATTTTCTTCAACAGCAACAATCATCCATTCAGAACCACCAACTGCATAGAAGTCTGTCTCAGAACCCACCTCAGAAGCATCAACAAACTACAATGGGTCAGAATCAACGGCCAAATTCGTTTCAATCCCCTATGCCTGATCATTTGAATCAACAATTACAGATGTCTGATAATCAGGTTCGACTTCAGTTGTTACAGCAGCTTCAACAGCAACAACAAACACTCTTGGCACAGCAGTCTGCATTGCATCAGCCTGCTCAAATTCAAATCCAAGACCAGCAGAGGCAGCTTTTAGATGTAGCACACAACTCTAGTGCCCTAACTGCTGGTCAAGTACCGGAAATTCCTCCTATGCTTCAAAACTCAATCCCTGAGGCTAATTCTATCATCCATCAGATAAAAATGCCTACTGGTCAGAAAAATATTCAATTCTCTCATCTATCTCAGCAACCTGCCTTGCTGTCTGAAATGTCTGGGCGTGTTGGACTTCCCCCTACAGTTACTACCAATCCACTTTCTGCTTCTGCTGGAAGTATACTGACCGGAGCAGGACAATCAGTAATTACTGATGATGCTCCATCTTGTTCTACTTCACCTTCCACAAATAACTGTGTCACTGCACTTCCTCCAGTGATAAGTTCCCAGATCCCTAGGAGCACAACAATAGGGGATGACATGGCTCAGTCTGCTGTCACGATCTTGAGTCCAAGTGCTCTAGAAACCATGTCATCTAATGCAACCTTGGTAAATGATGTACAGCCGAAGTACGAAGTAAAGCCTTTAAACATTTCCAAAAATCAGAATCAAGGGATTGTTGCCCCTCAGACATACCTGAATGGGGTTGTTGTCCAGGCAGACTATTTGGATTCATCATCTTCTACAACTTCACTTTGCCATTTTCAGAGTGATACTCATATGCATCAGAATAACAGCCCATTTTCTTATAATCCACAATTGATGTATTGTAGAGATAATAGTCAAAATGTGGAAGTTCAGGCTGATGCTAGGAGCAATGTTCCATTTGGCAATAACATTAATGGCCAAATGGGAATGCCATTGAATCTAGATTCTCTTCTAACCAAAGGCACAGTGGGGCTGGGGAAGGATTTGTCAAATAATTTCCCTTCAGGAGGCTTGCTTGGAGACTACGAAAATAACAGAAATGTTCAGCCAGAACTTTCAACTTCAATGGTCTCACAGACGTTTGAAGTCCCTGATATGACCTTCAATTCAATTGATTCTACGATAAATGGTAGTAGCTTCTTGAATAGGAGTCCCTGGGATCTACCACCACCTCCACCACCGCCACTACCACCTCCACCGCCACAACAACAACAGTTACAGAGGATGAGAACATACACCAAGGTTTAG 3024 0.4438 MATIAMKTQPDGAGAAVPNVGEGGEKKSINPELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQIPNYTNLPSKIPCLLHNVTLHADPDTDEVYAQMTLQPVPSFDTDALLRSDISLRSSKPQPEFFCKQLTASDTSTHGGFSVPRRAADKMFPSLDYSLQPPAQELVARDLHDNVWRFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFVRDEKQQLLLGIRRANKRQPSNISSSVLSSDSMHIGVLAAAAHAVANNSSFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMRFRMMFETEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESIAEERRSRVSVWEIEPVTAPYFICPPPFFRSKRPRLPGMPDDESDFNNLFKSAVPWLGDDMCIKDPQALPGLSLVQWMNIQQNPALASSVQPNYVPSMSGLILQNHPGADITNQLGFSTPQISQSNDVSVNAQNILQTSQQLDHIQKLPSTSSALGMVTQPLQQLGDITQQPRNMTNQTLPQNQVHTQLLNPQSLVLTNNFLQQQQSSIQNHQLHRSLSQNPPQKHQQTTMGQNQRPNSFQSPMPDHLNQQLQMSDNQVRLQLLQQLQQQQQTLLAQQSALHQPAQIQIQDQQRQLLDVAHNSSALTAGQVPEIPPMLQNSIPEANSIIHQIKMPTGQKNIQFSHLSQQPALLSEMSGRVGLPPTVTTNPLSASAGSILTGAGQSVITDDAPSCSTSPSTNNCVTALPPVISSQIPRSTTIGDDMAQSAVTILSPSALETMSSNATLVNDVQPKYEVKPLNISKNQNQGIVAPQTYLNGVVVQADYLDSSSSTTSLCHFQSDTHMHQNNSPFSYNPQLMYCRDNSQNVEVQADARSNVPFGNNINGQMGMPLNLDSLLTKGTVGLGKDLSNNFPSGGLLGDYENNRNVQPELSTSMVSQTFEVPDMTFNSIDSTINGSSFLNRSPWDLPPPPPPPLPPPPPQQQQLQRMRTYTKV 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12335g00002 1007 FunFam Auxin response factor 134 238 - -
Mupr12335g00002 1007 CDD B3_DNA 135 227 IPR003340 GO:0003677
Mupr12335g00002 1007 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 25 621 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr12335g00002 1007 MobiDBLite consensus disorder prediction 558 600 - -
Mupr12335g00002 1007 SUPERFAMILY DNA-binding pseudobarrel domain 126 266 IPR015300 -
Mupr12335g00002 1007 ProSiteProfiles B3 DNA-binding domain profile. 136 238 IPR003340 GO:0003677
Mupr12335g00002 1007 MobiDBLite consensus disorder prediction 977 996 - -
Mupr12335g00002 1007 FunFam Auxin response factor 301 372 - -
Mupr12335g00002 1007 SMART B3_2 136 238 IPR003340 GO:0003677
Mupr12335g00002 1007 Pfam Auxin response factor 263 346 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr12335g00002 1007 Gene3D - 134 237 IPR015300 -
Mupr12335g00002 1007 Gene3D - 301 372 - -
Mupr12335g00002 1007 Pfam B3 DNA binding domain 136 237 IPR003340 GO:0003677
Mupr12335g00002 1007 MobiDBLite consensus disorder prediction 971 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12335g00002 Mupr-Chr12335 6787 12177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12335g00002 24 486 B3 DNA Binding Superfamily AT5G20730 66.667 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr12335g00002 B3 9e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12335g00002 - - gmx:100791531 1639.78