Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12335g00001 ATGTCTCAATGGTGGATTCATGTATATAAACGAGGAGCTGTGGGAAGGTCCATAGACATAACGCGATATTCAGGTTATGAGGAGCTTAAACAGGACCTGGCTCTTAGGTTTGGTATTGAGGGACAACTGGAGGATCGACAAAGGATTGGTTGGAAACTTGTTTATGTAGATCATGAGAATGATGTTCTGCTTGTGGGAGATGATCCCTGGGAGGAGTTTGTTAACTGTGTCCGCTGCATTAAAATACTTTCTCCTCAAGAAGTTCAACAAATGAGCTTGGATGGAGATTTTGGCAATGGTGGTGGCCTTCCATATCCAGCAGGTAGCAGCTCTGATGGTGGGAATACTTAA 351 0.4387 MSQWWIHVYKRGAVGRSIDITRYSGYEELKQDLALRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGGLPYPAGSSSDGGNT 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12335g00001 116 MobiDBLite consensus disorder prediction 95 116 - -
Mupr12335g00001 116 Pfam AUX/IAA family 49 88 IPR033389 -
Mupr12335g00001 116 FunFam Auxin response factor 1 92 - -
Mupr12335g00001 116 SUPERFAMILY CAD & PB1 domains 17 81 - -
Mupr12335g00001 116 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 92 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr12335g00001 116 ProSiteProfiles PB1 domain profile. 3 87 IPR000270 GO:0005515
Mupr12335g00001 116 Gene3D - 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12335g00001 Mupr-Chr12335 5614 6755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12335g00001 5 115 B3 DNA Binding Superfamily AT1G19220 67.257 4.80e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr12335g00001 AUX_IAA 5.3e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12335g00001 - - gmx:100803302 216.468