Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12329g00001 ATGCTGGATCTTAACCTCAACGCCGACTCTGCCTCCGACAACAACACACCTCCGCTCTCCGCCGCGCAAATGGAGAGCTCCGGCAGCTTCAATTCCTCCGTCGTCAATGCCGCCGACACCGAAGACTCCTGCTCCTACGGCGACGCCGTCGCCTACAACTTCGCCATCCTCAACACCACCGCTGCCGTCGGAGACTCATCCGTTCGGACCATCCAGCTCTTCCCGACCGCCGAATCGGGAGCCTCGCCGGGATGGCTTAATCACCGTGGTGCTGCGCCGGAGCAGAGGATCACTCCCCGGCAGCCGCAGGTGAAGAAGAGCCGCCGCGGACCGCGGTCGCGGAGCTCGCAGTATCGCGGCGTTACTTTCTACCGGAGAACCGGAAGATGGGAATCGCACATTTGGGATTGTGGGAAGCAAGTGTACTTGGGTGAGGACGCAAGTGGATTTGACACTGCGCATGCCGCAGCAAGGGCTTATGATCGAGCTGCGATCAAGTTCCGTGGCGTTGATGCGGATATCAATTTCAACGTTAGCGATTACGATGAAGATATAAAGCAGATGAGTAACTTCACGAAGGAGGAGTTTGTGCATATTCTGCGTCGACAGAGCACTGGTTTTTCGAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAGTGCGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTTGGGAAAAAGTATATATATCTTGGGCTATTCGACAGCGAATTAGAGGCTGCAAGAGCGTATGATAGGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAACTTCGAGCCCAGCTTATATGAAGGGGACGTAATTTCCCAGTCTGATAATGAAGATAGCAAGCAAAGTCTTGATCTTAACTTGGGCATAGCTCCCCCTTCTTACTCTGATGGTCAATTCAAGAACACGCCCAGCAACGGGAGTGGTTTGAAAGCTCCGCACAGCTGGGATGATATCCCTGTCGATAAGAGAGTTATGTTTGAGCACTCTGGATCAAGATCACTGAATGTTCAGCCATCTCATGACTTCTCCATAGCATCTGAGCATCATCCTTCCGTCTGGAGTCGTAGCAATTTCTTCCCCATCTGCGAGGAAACAGCAATAGAGAAGAGGATGGAATCTGCTCCCATGCCAAATTGGGCATGGCAAGTCCAAAATCCTTATGGCGGGGCAACTCTTACTCCACCGTTCTCTACTGCAGCATCATCAGGATTCCCTTCAACAGTAATACCATCAGCTGCGGATAGTCAAATTCGTTTTCCAAATATGACATTCCTTCACCCACATTTTCCACCATCTATCACTAACTCCAGCACCATATCCACTTTCTACTGCGGAACAGCAAAGCTGTCTTATGGTCTTTGCTAA 1389 0.514 MLDLNLNADSASDNNTPPLSAAQMESSGSFNSSVVNAADTEDSCSYGDAVAYNFAILNTTAAVGDSSVRTIQLFPTAESGASPGWLNHRGAAPEQRITPRQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGEDASGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSLYEGDVISQSDNEDSKQSLDLNLGIAPPSYSDGQFKNTPSNGSGLKAPHSWDDIPVDKRVMFEHSGSRSLNVQPSHDFSIASEHHPSVWSRSNFFPICEETAIEKRMESAPMPNWAWQVQNPYGGATLTPPFSTAASSGFPSTVIPSAADSQIRFPNMTFLHPHFPPSITNSSTISTFYCGTAKLSYGLC 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12329g00001 462 SMART rav1_2 117 183 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 SMART rav1_2 213 276 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 Pfam AP2 domain 117 169 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 Pfam AP2 domain 212 262 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 84 303 - -
Mupr12329g00001 462 MobiDBLite consensus disorder prediction 82 118 - -
Mupr12329g00001 462 PRINTS Ethylene responsive element binding protein signature 214 225 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 PRINTS Ethylene responsive element binding protein signature 252 272 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 CDD AP2 212 272 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 FunFam AP2-like ethylene-responsive transcription factor 116 179 - -
Mupr12329g00001 462 FunFam AP2-like ethylene-responsive transcription factor 212 272 - -
Mupr12329g00001 462 SUPERFAMILY DNA-binding domain 212 271 IPR016177 GO:0003677
Mupr12329g00001 462 SUPERFAMILY DNA-binding domain 116 179 IPR016177 GO:0003677
Mupr12329g00001 462 Gene3D AP2/ERF domain 212 271 IPR036955 GO:0003700|GO:0006355
Mupr12329g00001 462 Gene3D AP2/ERF domain 116 179 IPR036955 GO:0003700|GO:0006355
Mupr12329g00001 462 MobiDBLite consensus disorder prediction 1 25 - -
Mupr12329g00001 462 ProSiteProfiles AP2/ERF domain profile. 117 177 IPR001471 GO:0003700|GO:0006355
Mupr12329g00001 462 MobiDBLite consensus disorder prediction 7 25 - -
Mupr12329g00001 462 ProSiteProfiles AP2/ERF domain profile. 213 270 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12329g00001 Mupr-Chr12329 5117 7963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12329g00001 97 337 AP2-EREBP Transcription Factor Family AT4G36920 67.623 8.37e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr12329g00001 AP2 1.5e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12329g00001 K09284 - gmx:100808212 764.607