Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12323g00002 ATGGAAGGACTAAGCAAGAAGGAGCCATACTTTTGTGAGAGACCAAGCATCTTCTCTTCTGCTCCAGAGGCTCCCCCAAGTCCAAGCACCCCACTGCAGCATCCACAGGAAAAGAAACATCTATCTGTTGAGGAAGAAGAGGAAGAAAAGCATGTTAGCATATTGGATCTGAATGTTTCAGGTGATGATTCCTTCACTCCAGAAGGACCAGAACTGAACCTCATCACTTGTTTGGATGTGGGGTCATCCTCCAATGCCAATAATATTAATTCATCAGAAACAACCCCTCTTGGTTCTGATGCTGAGCCAAGAGTATTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGCTCACAGGCACTAGGGGGCCACCAAAATGCACACAAGAGGGAGAGGTCAATAGCAAAGAGAGGGCACAGGTTTGGAGCACAGCAGGTAATGGCTTTTGGCCTTCCCCTATTGCATACCAACAACAGCTATACAACAAGCATGGCTTCTCTACCCCTCTATGGTGCTTGCAGCAATAGGGGTCTTGGAATTCAGGCACACTCCATGATCCACAAGCCTTCTCATCATCATCATCATCATCATCATCATGTCAATGGATTTGGAGGCTCTCATGGACACCACCATCATGGTTGGTCAAGACCCATCATTGATCAACAACCTGGAATTGCAAAGCTGGCTGTGCCAGATTTTCACAAAACAAAATCAGCATTATCATCATCTCAAACACAAAGCAGTGTTGGTAGGTTTGAAATGGTTAACACCATGGTCAATTCTGCAGCCAGTAAAGAAATCAGTGGATGTGTGGCCGCTGCTGGAACTCGATTATTCCTCTTTCCATAA 849 0.4558 MEGLSKKEPYFCERPSIFSSAPEAPPSPSTPLQHPQEKKHLSVEEEEEEKHVSILDLNVSGDDSFTPEGPELNLITCLDVGSSSNANNINSSETTPLGSDAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGAQQVMAFGLPLLHTNNSYTTSMASLPLYGACSNRGLGIQAHSMIHKPSHHHHHHHHHVNGFGGSHGHHHHGWSRPIIDQQPGIAKLAVPDFHKTKSALSSSQTQSSVGRFEMVNTMVNSAASKEISGCVAAAGTRLFLFP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12323g00002 282 MobiDBLite consensus disorder prediction 189 217 - -
Mupr12323g00002 282 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Mupr12323g00002 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Mupr12323g00002 282 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 4 258 IPR044246 GO:0009788
Mupr12323g00002 282 MobiDBLite consensus disorder prediction 189 212 - -
Mupr12323g00002 282 SUPERFAMILY beta-beta-alpha zinc fingers 103 133 IPR036236 -
Mupr12323g00002 282 MobiDBLite consensus disorder prediction 1 50 - -
Mupr12323g00002 282 Gene3D Classic Zinc Finger 83 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12323g00002 Mupr-Chr12323 29836 31561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12323g00002 55 254 C2H2 Transcription Factor Family AT5G10970 43.415 6.96e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12323g00002 - - gmx:100809569 337.035