Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12317g00016 ATGAGCAACATAAGCATGGTGGAGGCAAAGTTGCCACCAGGGTTCAGGTTTCATCCAAGAGATGAAGAGCTTGTGTGTGATTACTTGATGAAGAAGGTGACACACAATGATTCCCTTCTCATGATAGACGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAACAGCATGTGTGGGAGGGAAGGACTGGTATTTCTACACACAACGAGACCGTAAGTATGCAACAGGGCTACGCACAAACCGTGCCACTGCCTCAGGGTATTGGAAGGCCACAGGGAAGGACAGGGCTATCCTCCGCAAGGGCACTCTTGTTGGTATGAGGAAGACTTTGGTATTCTATCAAGGAAGGGCACCCAAAGGGAGAAAAACTGAGTGGGTCATGCATGAGTTTCGTATTGAAGGTCCTCATGGACCTCCTAAAGTTTCTTCTTCCAAGGAAGATTGGGTTTTGTGTAGGGTGTTCTACAAAAACAGAGAAGTTGCAGCCAAACCTAGCATGGGTAGCTGCTATGAGGACACAGGCTCTTCATCTCTTCCTGCATTAATGGACTCTTACATCAGTTTTGACCAAACTCAAACCCATGTAGATGAGTTTGAGCAAGTGCCCTGCTTCTCCATTTTTTCTCAGAACCAAACAAACCCCATTTTCAACCACATGGCCACTATGGAACCTAAGATACCGGCCAACCATGCAACCACATATGGAGGAGCACCAAATTTGGGTTATTGCATAGACCCTTTATCCTGTGACAGAAAAGTGCTAAAAGCTGTTTTGAGTCAAATCACAAAGATGGAAAGGAATCCACTTAACCAAAGTCTAAAAGGGTCACCAAGTTTAGGAGAAGGGAGTTCTGAGAGTTACTTATCTGAAGTGAGGATGCCCCACATGTGGAACAATTACTGA 909 0.4532 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHNDSLLMIDVDLNKCEPWDIPETACVGGKDWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKVSSSKEDWVLCRVFYKNREVAAKPSMGSCYEDTGSSSLPALMDSYISFDQTQTHVDEFEQVPCFSIFSQNQTNPIFNHMATMEPKIPANHATTYGGAPNLGYCIDPLSCDRKVLKAVLSQITKMERNPLNQSLKGSPSLGEGSSESYLSEVRMPHMWNNY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12317g00016 302 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 210 - -
Mupr12317g00016 302 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Mupr12317g00016 302 FunFam NAC domain-containing protein 100-like 20 162 - -
Mupr12317g00016 302 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Mupr12317g00016 302 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Mupr12317g00016 302 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12317g00016 Mupr-Chr12317 92436 97352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12317g00016 2 300 NAC Transcription Factor Family AT1G56010 61.199 2.96e-127 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr12317g00016 NAM 3.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12317g00016 - - gmx:100301890 587.8