Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr12304g00003 | ATGGCAAGCATCTCTAGCATTCCATCATACATAAAAGCTTGGGTGTATTCTGAATATGGGAACATAGAAGAGATTCTAAAATTTGATCCTAACGTAGCTATATCAGACATCAAGGAAGACCAGGTGCTCATAAAGGTTGTGGCTGCAAGCCTTAATCCTGCAGATTATAAGAGGGCTCTTGGCTATTTCAAGAACACTGACTCTCCCTTGCCTACTGTTCCAGGGTATGATGTTGCTGGTGTGGTGGTAAGGGTGGGAAGTCAAGTAAAGAAATTCAAGGTTGGGGATGAA | 291 | 0.4261 | MASISSIPSYIKAWVYSEYGNIEEILKFDPNVAISDIKEDQVLIKVVAASLNPADYKRALGYFKNTDSPLPTVPGYDVAGVVVRVGSQVKKFKVGDE | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr12304g00003 | 97 | SUPERFAMILY | GroES-like | 6 | 96 | IPR011032 | - | |
| Mupr12304g00003 | 97 | Pfam | Alcohol dehydrogenase GroES-like domain | 40 | 96 | IPR013154 | - | |
| Mupr12304g00003 | 97 | Gene3D | - | 1 | 97 | - | - | |
| Mupr12304g00003 | 97 | PANTHER | NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC | 2 | 97 | IPR044626 | GO:0016628 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr12304g00003 | Mupr-Chr12304 | 14064 | 14625 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr12304g00003 | 64 | 97 | Monolignol Biosynthesis Gene Families | AT1G72680 | 50.000 | 5.65e-07 | 43.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr12304g00003 | K18980 | - | gmx:100791274 | 154.451 |