Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12298g00003 ATGTCATCCTCTTCCACCACATTATCACTGGACCACCTCCCTCCTTCCGAACAGCTTTGTTATGTTCACTGCAATATTTGTGACACCGTCCTCGCTGTAAGTGTTCCCTGCACAAGCTTGTTCAAGACCGTCACCGTCCGATGCGGCCATTGCACTAACCTCCTGCCAGTGAACATGCGCGGGTTGCTTATGCCATCTCCCTCTCAATTTCATTTGGGACACTCTTTCTTCTCCCCATCCCATAACCTTCTGGAGGAGATACCAAACCCCTCTCCAAATTTTCTTATGAACCAAACAAATTTAAGTGCATCAAATGAGTTCTCTATGCCCGCTAGGACTGCAGCTGATGAGCTTCCACGGCCACCGATCATAAATAGACGTCCAGTTCCTTTGGTAGAAGGAAAAGGGTCTTTTAAGGCTTCATCACGACAGTACCTAAACCCTTCCTAG 450 0.4778 MSSSSTTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLMPSPSQFHLGHSFFSPSHNLLEEIPNPSPNFLMNQTNLSASNEFSMPARTAADELPRPPIINRRPVPLVEGKGSFKASSRQYLNPS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12298g00003 149 PANTHER PROTEIN YABBY 6-RELATED 1 128 IPR006780 GO:0007275
Mupr12298g00003 149 Pfam YABBY protein 15 93 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12298g00003 Mupr-Chr12298 9773 10714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12298g00003 16 63 C2C2-YABBY Transcription Factor Family AT2G26580 66.667 6.94e-19 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mupr12298g00003 YABBY 3e-28 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12298g00003 K25796 - gmx:100786175 242.662