Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1227g00005 ATGGCAGTTATGAACTTATATCATTCCTTACATGAAAAGAAGGACGAGCACGAACACAACCAACCACAAATGGTGGGTGGAAACAACAATTCAAGGCAATACAATGATACAACTTGCACCAAAATCTTTGTTGGAGGGTTAGCTTGGGAGACTCAAAGGGACACAATGAGGAGGTATTTTGAGCAGTTTGGAGAGATCTTAGAGGCTGTTATTATCACAGACAAGAACACTGGGAGATCCAAGGGTTATGGTTTTGTCACATTCAAGGATCCAGAGGCAGCAACGAAAGCATGTCAGAACCCCTCTCCAATAATTGATGGGAGAAGGGCAAACTGTAATATTGCATCTATTGGTGCAAACAAGAATCGCACACAACAGGCTCCACAACATGGTCTCAATTCAAGAATTGAGAAGCAACTTTATGCTGTGGGTGCAGGACGGTTTAGAGCAGCACCTGGTGTGTTGGCCTCACCTGCTTATAATTGCCCTTCCTCTACATTTTTCCATCAAAACAGTGGCCAATACCCGTTTCCTAATTCAACTTTTGGATATACTGGATATTCACAAGACACAATGTACCCCATGAACTGTTATGGGGTATTTGGAGGTCAACAGTTCTCAACTTTCTACCCCTCCAATGGGGCATCTGGGGCAGTGGGATTGGTCCATAACATTTACCCTTTCTGTGGCCAGTATCCATACAATAGCCAGGATCATGGTTTTGGAGTCCAATATCCCCAAATGATGCAGTTTCCAATTCTCCCTAGGCAATATGGCTCAGCTGGTATCCTTACATTTCCCTCTTCATTGGCAATGCCAACTACTAGGGCAGTTACAACAACCGCAACTACAACAACAACTGAGGCAATAGGAACAAGCACAGGTGCTTCACAAGCCGCTGGAACAACTTCTGAACAAAAATCTTCAGCTGAATCTCTACATAGATAA 948 0.4367 MAVMNLYHSLHEKKDEHEHNQPQMVGGNNNSRQYNDTTCTKIFVGGLAWETQRDTMRRYFEQFGEILEAVIITDKNTGRSKGYGFVTFKDPEAATKACQNPSPIIDGRRANCNIASIGANKNRTQQAPQHGLNSRIEKQLYAVGAGRFRAAPGVLASPAYNCPSSTFFHQNSGQYPFPNSTFGYTGYSQDTMYPMNCYGVFGGQQFSTFYPSNGASGAVGLVHNIYPFCGQYPYNSQDHGFGVQYPQMMQFPILPRQYGSAGILTFPSSLAMPTTRAVTTTATTTTTEAIGTSTGASQAAGTTSEQKSSAESLHR 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1227g00005 315 Gene3D - 3 132 IPR012677 -
Mupr1227g00005 315 MobiDBLite consensus disorder prediction 279 308 - -
Mupr1227g00005 315 FunFam RNA-binding protein 24-B isoform X1 27 134 - -
Mupr1227g00005 315 PANTHER BOULE-RELATED 24 285 - -
Mupr1227g00005 315 MobiDBLite consensus disorder prediction 12 32 - -
Mupr1227g00005 315 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 117 IPR000504 GO:0003723
Mupr1227g00005 315 SUPERFAMILY RNA-binding domain, RBD 21 127 IPR035979 GO:0003676
Mupr1227g00005 315 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 100 IPR000504 GO:0003723
Mupr1227g00005 315 MobiDBLite consensus disorder prediction 279 315 - -
Mupr1227g00005 315 CDD RRM_RBM24_RBM38_like 40 115 - -
Mupr1227g00005 315 SMART rrm1_1 41 113 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1227g00005 Mupr-Chr1227 43354 45213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1227g00005 36 224 C2H2 Transcription Factor Family AT2G19380 31.088 7.88e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1227g00005 - - gmx:100782484 434.106