Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12279g00002 ATGACAAATGAGGTGGACGACAATATGCACTGCAATGATCAGACTGGGTCTCATTTAAATGATGAGGGTAATGGAGGAGGTGTTGTTCTGAAGAAAGGGCCATGGACGGCTGCTGAAGATGCTATTTTGGTGAACTATGTCAAGAAGCATGGAGAGGGAAACTGGAATGCTGTTCAGAGGTACTCAGGCCTGTCTCGTTGTGGAAAAAGTTGTCGACTGCGATGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGAGCATTTACCGCAGAGGAGGAGCTGTTGATTGCTGAACTCCATGCCAAAATGGGAAATAAATGGGCACGCATGGCGGCACACTTGCCTGGTCGTACAGATAATGAAATAAAAAACTACTGGAACACCCGGATCAAGAGGCGTCAACGGGCTGGCTTGCCACTTTATCCTCCTGAAGTATTTTTGCAAGCATTTCAAGACAGTAAGCATACCCAAGTTACTGGAGGAACTAGTGATGGTGATAGTGGGCATCATGATTTCTTGGAGAAGAACAATTATGAGATACATGATGCAATATTTGACAGTTTGCAGGAAAATCAGGAAATCTTACCTTTTGTGCCTGAGCTTCCTGATATTTCTCCCAATAGCATTCTGCCAAATGGTCTTGGTTCTCCTCCGTATTGTAATTTTGTGCCATCAACATTACCTAACCATGATCATCTTCAAGAGTCAACAATGTCATTTCTTGGTTCCAGTGAATTGAACAGGAATGGGTTTTATCCATTTGACCATATTGAGGATAATACTTCTGATAAGATTGCAGAATCATTTGGATTGCATTCTCCCCTTGATCACGGTGCCTCCTCACATGGCTCAATTTGTTACAGCCATTCATTATCGAATGGCAATTCCTCTACTTCTAAGCTGATTTCTGAAGCTGTGAAGCCAGAGCTCCCTTCACTCCAATATCCAGAAACCGAATTTGGTAGCTGGGGTACCTCTTCCCCACCTCCATTGAATGAATCTATCGATGTTTTCATTCATTCTCCTCAGCCACCTAATGCACTAGATTCAGTTTGTTCTTCACCACATAATAGTGGCTTGCTTGATGCATTAATTTATCAGGCGAAGACTCTTAGTTGTTCAAAGAATAATGGTTCTGACAAGAGTTCAAATTCATCTATAGCAACTCCTGGTGACAGAGCTGAGAGTTCTGCTCCGAACATGTATGAGACAGAATGGGAGGATTATGCTGACCCTGTATCTCCCTTTGGTGCAACTTCAATCCCAAATGAGTGTCCTGCTGTTAGCACCAATGGAAACTCGTGGGATGAATGGGCACCTTTTCAGACCTTTTGTGGCAACAATGTGAAATTACAGTCAGTTGACCAGGTTTTGGCCCCTAAGAGTGAAAATCAATCCTCGTCTCTGTTGAATCTCACTTGGCCAGATGTCTTGCTAGCTTCAGATTGGCACGAGCTGTATTCTGAGCATGGCAAGAACCAAACCATCATCACTGATGCTAGTGATGATATCAGCGGTGGACAAAATGTTGCATTAGTTTTGTTGTTGTAA 1551 0.4313 MTNEVDDNMHCNDQTGSHLNDEGNGGGVVLKKGPWTAAEDAILVNYVKKHGEGNWNAVQRYSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEELLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVFLQAFQDSKHTQVTGGTSDGDSGHHDFLEKNNYEIHDAIFDSLQENQEILPFVPELPDISPNSILPNGLGSPPYCNFVPSTLPNHDHLQESTMSFLGSSELNRNGFYPFDHIEDNTSDKIAESFGLHSPLDHGASSHGSICYSHSLSNGNSSTSKLISEAVKPELPSLQYPETEFGSWGTSSPPPLNESIDVFIHSPQPPNALDSVCSSPHNSGLLDALIYQAKTLSCSKNNGSDKSSNSSIATPGDRAESSAPNMYETEWEDYADPVSPFGATSIPNECPAVSTNGNSWDEWAPFQTFCGNNVKLQSVDQVLAPKSENQSSSLLNLTWPDVLLASDWHELYSEHGKNQTIITDASDDISGGQNVALVLLL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12279g00002 516 FunFam MYB-related transcription factor 31 84 - -
Mupr12279g00002 516 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Mupr12279g00002 516 Gene3D - 87 133 - -
Mupr12279g00002 516 CDD SANT 87 128 IPR001005 -
Mupr12279g00002 516 MobiDBLite consensus disorder prediction 374 399 - -
Mupr12279g00002 516 ProSiteProfiles Myb-like domain profile. 30 79 IPR001005 -
Mupr12279g00002 516 SUPERFAMILY Homeodomain-like 31 126 IPR009057 -
Mupr12279g00002 516 MobiDBLite consensus disorder prediction 1 21 - -
Mupr12279g00002 516 FunFam Transcription factor GAMYB 87 133 - -
Mupr12279g00002 516 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 499 - -
Mupr12279g00002 516 MobiDBLite consensus disorder prediction 1 26 - -
Mupr12279g00002 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Mupr12279g00002 516 CDD SANT 34 79 IPR001005 -
Mupr12279g00002 516 Gene3D - 31 84 - -
Mupr12279g00002 516 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Mupr12279g00002 516 Pfam Myb-like DNA-binding domain 85 128 IPR001005 -
Mupr12279g00002 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 79 IPR017930 -
Mupr12279g00002 516 MobiDBLite consensus disorder prediction 374 393 - -
Mupr12279g00002 516 SMART sant 31 81 IPR001005 -
Mupr12279g00002 516 SMART sant 84 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12279g00002 Mupr-Chr12279 16680 20695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12279g00002 2 483 MYB Transcription Factor Family AT3G11440 41.897 6.33e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr12279g00002 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12279g00002 K09422 - gmx:100805804 858.211