Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12258g00001 ATGGCGGAAGAACACCGATGCGAAACTCCCGAAGGTCACAGACTCTGCGCCAACAACTGCGGTTTGTTCGGCAGCTCCGCCACCATGAATCTCTGCTCCAAATGCTACAGCGCGATCTGTTTGAAGGAACAAGAAGAAGCGTCGACCAAATCCACCATCGAAACCGCTCTCTCTTCATCTCCGTCGTTGTCCACATCCTCTCTGTCGTTGTCCACGGTGGACGCCGTCGAAGCTCTGTCTCCGGCGGAGATCGCAGTCGCGGTGACGGTCACCGTCGCGGCCGCGTCGAGTTCTCTATCCCCCGGTACGGTTTCCGCTTTGGCGCAACCGAACCGGTGCGCCACGTGTCGGAAGCGCGTGGGGTTGACGGGGTTCAAGTGCAGGTGCGGGGTCACGTTCTGCGGGACCCACAGGTACCCGGAGAAACACGCGTGCGGCTTCGACTTTAAGACGGTGGGGCGAGAGGAGATTGCACGGGCCAACCCTGTGATCAAAGCGGAGAAGCTGCGGAAGATTTGA 519 0.5973 MAEEHRCETPEGHRLCANNCGLFGSSATMNLCSKCYSAICLKEQEEASTKSTIETALSSSPSLSTSSLSLSTVDAVEALSPAEIAVAVTVTVAAASSSLSPGTVSALAQPNRCATCRKRVGLTGFKCRCGVTFCGTHRYPEKHACGFDFKTVGREEIARANPVIKAEKLRKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12258g00001 172 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Mupr12258g00001 172 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mupr12258g00001 172 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mupr12258g00001 172 SUPERFAMILY AN1-like Zinc finger 107 167 IPR035896 -
Mupr12258g00001 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Mupr12258g00001 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Mupr12258g00001 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 172 - -
Mupr12258g00001 172 Gene3D - 90 168 IPR035896 -
Mupr12258g00001 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Mupr12258g00001 172 Gene3D - 1 62 - -
Mupr12258g00001 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Mupr12258g00001 172 FunFam Zinc finger AN1-type containing 6 89 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12258g00001 Mupr-Chr12258 16952 17470 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12258g00001 1 172 C2H2 Transcription Factor Family AT3G52800 56.647 2.85e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12258g00001 - - gmx:100813749 250.366