Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12257g00002 ATGCTTAGGTATTTTGTTGGAAGGATACAAAAGGGTCTCTCACTGTTTGTATCTAGAAGGCCTGCATTGAGCTACTTGCAGGGTGAGGATCATACCACAACTTCAGCACCAGATGATGTCATGGAAGGCTATTTTGCTGTTCTTGCAATCAAGGGTGAGGAAGCCAAAAGGTTTATTGTTGGGTTGGACTACTTGTCTGATCCTTCATTCTTGGGACTTCTGGAGCAAGCTCGTGAAGAGTTTGGTTTCAGACAGCAAGGAGCTATTGCACTCCCTTGTCGGCCTCAGGAATTGCAGAACATTCTAAATGTAATCTTGGCACCAATTAGGAGATCAATAACACTGATCAGCAACGAAGATTCACTGCATACAGAAACAACTGTGCCAGATGACGTTTTGGAAGGACACTTTGTGGTTCTTGCTAACAAGGGTGAAGAAACCAAACGGTTTATTGTGGAGTTGCACTATTTGGCTGACCCTGCGTTTTTGGGACTTCTGGAGCGGGCAAAAGAAGAGTATGGTTACAGACAGAAGGGGGCTTTGGTAATTCCATGCTACCCTCAAGAACTAGAGAAGATTCTAGAAGAACCAAGGGATGGCAGTGTAGGAGATGGAGGCAAATTAACAGATTCAATTCAAGTTAGTGAATGTAGCGCCATTTCCTGCAGTTGA 672 0.442 MLRYFVGRIQKGLSLFVSRRPALSYLQGEDHTTTSAPDDVMEGYFAVLAIKGEEAKRFIVGLDYLSDPSFLGLLEQAREEFGFRQQGAIALPCRPQELQNILNVILAPIRRSITLISNEDSLHTETTVPDDVLEGHFVVLANKGEETKRFIVELHYLADPAFLGLLERAKEEYGYRQKGALVIPCYPQELEKILEEPRDGSVGDGGKLTDSIQVSECSAISCS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12257g00002 223 Pfam Auxin responsive protein 32 104 IPR003676 GO:0009733
Mupr12257g00002 223 Pfam Auxin responsive protein 124 195 IPR003676 GO:0009733
Mupr12257g00002 223 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 123 193 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12257g00002 Mupr-Chr12257 10467 14799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12257g00002 80 204 Calmodulin-binding Proteins AT3G43120 31.008 8.41e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12257g00002 - K14488 gmx:100809715 188.734