Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12253g00002 ATGAATGTCACTGGATGCAAATGCAAAGGCACATGTAATGACCCAACAACCTGTGCATGTGCGTTGCGTAATGGCTCTGATTTTCCCTATGTATCTCAGAATGGTGGCAGATTAGTTGAAGCTAAAGATGTAGTATTTGAATGTGGTCCCAAATGTGGTTGTGGTCCTGATTGTGTGAACCGAACTTCTCAAAAAGGACTTAGATATCGGCTGGAGGTTTTCCGTACTGCAAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCAGGAGCACCAGTTTGTGAGTACACAGGAATACTTGCTAGGACGGAAGATATGGACAGTGTATTGGAAAACAATTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGGCTTGGTGGAAGAGAGAGGCGGTCACAAAATGGAGATGGAGGGGTTCCAGCAAATCTTTTGGACAAATATGATCAAAGTTCTGAAAGTGCGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAATGTGTTTTGAGCACACACCATGATTTGAAATTGGCTCGTGTAATGCTGTTTGCTGCCGACAACATACCCCCTTTGCAGGAATTAACGTATGACTACGGTTATGAGCTTGACAGCGTCTTGGACTCCGATGGGAAGATCAAGCAAATGCCATGCTATTGTGGAGCAGTGGACTGCAGGAAG 738 0.4282 MNVTGCKCKGTCNDPTTCACALRNGSDFPYVSQNGGRLVEAKDVVFECGPKCGCGPDCVNRTSQKGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARTEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQNGDGGVPANLLDKYDQSSESAPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHHDLKLARVMLFAADNIPPLQELTYDYGYELDSVLDSDGKIKQMPCYCGAVDCRK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12253g00002 246 Gene3D SET domain 1 246 IPR046341 -
Mupr12253g00002 246 ProSiteProfiles SET domain profile. 69 219 IPR001214 GO:0005515
Mupr12253g00002 246 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 4 241 - -
Mupr12253g00002 246 SMART set_7 69 225 IPR001214 GO:0005515
Mupr12253g00002 246 ProSiteProfiles Pre-SET domain profile. 4 66 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr12253g00002 246 Pfam SET domain 80 219 IPR001214 GO:0005515
Mupr12253g00002 246 ProSiteProfiles Post-SET domain profile. 233 245 IPR003616 -
Mupr12253g00002 246 Pfam Pre-SET motif 4 61 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr12253g00002 246 SUPERFAMILY SET domain 3 246 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12253g00002 Mupr-Chr12253 3051 4243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12253g00002 4 246 EF-hand Containing Proteins AT5G13960 68.313 7.33e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr12253g00002 SET 6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12253g00002 K11420 - gmx:100796701 479.559