Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12252g00002 ATGTCCACCTTCTATTCAAATCTGCAACTATGCTCCACTCTTTTTCAACTATTGCTCTTCTCTTCCTCACCAATTAATTATTTGAATGCTCCTCCTATGGGAAGAACCAAAGTTTCCACCCTCTTTGCCCATGACAATTACATGCTTCCTTATTACAACCCCATAAGACAAACACTTGTAAACAGGCCAAATACCCAGAAAGATCGATTCCCCTTTTCACTCTTTGGATTATTGAGGAGACTCATTCGTTCAAGAAAAGTTGATGGGGGCTCAAAAACTGAGGAAGAGGAGAAAGTCTACTCTTGGTTATACACCTTGGCTCAGTCTCACAAAAACTTGGTCTTCGAGTACGTTAGGTCCACTGAAAGAGGCTTAAGTTTCACAGAAGCCGATAGGAGACTGCGGGAAAATGGGCCAAATGTTCCACTTGAATATTCCTTTCCAAGATGGTGGCATCTTCTATGGAACGCTCTTTTCCATCCTTTCAATATCATTCTTATTATTTTGTCAGTTCTGTCATTCATGACCTGTGACAGTTCAAATGGATTTATCATGCTCATATTGGTTTTCATCAGTGTCACCCTCCGTTTCTATCAGGAATACAACAGCTCAAAAGCTGCAATCAAGCTTTCAGAATTTGTAAAATGCCCAATAAAAGTTCAAAGATGTGCTGGTAGAGTTGTGCAGACAGAACTAATAGTTCAAGTTGATCAGAGGGATGTAGTTCCAGGTGACATTGTGATTTTTGAACCTGGTGACCTCTTTCCTGGAGATATCAGGTTGTTATCTTCTAAGCAACTTGTTGTAAGCCAGGCCTCTCTAACTGGGGAATCTTGTACAACTGACAAAACTGCTGATATCAGAGAAGTTCTCAGCACTCCTTTATTGGATTTAAAGAACATCTGCTTTATGGGCACAAACGTGGTATCAGGTACTGGAAAAGGCTTAGTGATTTCAACTGGATCCAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAAAAGAAGCCACCAGATGACTTTGAAAAGGGTCTGAGATGGATATTTTACTTGATTATTTCTGTTATGCTAGCAGTTGTTACCATCATGTTTGTGATAAATTACACTACAAGTCTTAATTTGAGCGAAAGCGTTCTTTTTGCCATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATCATTAACACGTGCCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGATGTATAGTAAAGAGTTTAACATCTATACGCGAGATGGGATCAATGGATATTCTTTGTATTGACAAGACAGGCACTCTTACAATAAATCATGCAATCATGGTTAATCATCTTGACTGCAGGGGTTTACCCCAAGAAAAAGTTTTACGCTATGCCTTCCTCAACTCTTACTTCAAGTCTGACCAGAAGTATCCTCTGGATGATGCAATTCTGTCATTTGTATATTCAAATGGATTCAGGTTTCAGCCATCTAAGTGGAGTAAGATAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGACAGAAACTCACAATTCTTGGGCAGGTTCATGGTAACAAAAGGAGCACTGTTAGAAGTATTGAAAGTTTGTTCTTTTATTGAGAATTTCGATAAAGATGAAATATCCACCTTCTCCTCAGATGATTATCAGCGGATTTTAAATCTCTCAGAAGATTTGAGCAATGAAGGGTTAAGGGTTATAGGAGTAGCAATAAGGAAGCTGAAAATGGTGCAAACATGCGAAAGAAGTAATGGAAGCAAGGGAGAAGAAGAGGACATGGAAAGAGACATGGTGTTCCTTGGCCTCATAACGTTTTTTGACCCACCCAAGGACTCAGCAAAGCAAGCACTGTGGCGTTTGTCTGAGAAGGGAGTGAAAGCAAAGGTTCTAACTGGTGACTCGCTCTCCTTGACAACAAGGGTATGCAGGGAAGTTGGCATAAGCACCACTCATGTAATAACAGGTCCTGAGCTAGAGCAACTTGACCAAGACACTTTCCACGAGACAGTTAAAAGAGCCACAGTACTAGCACGTCTCACCCCAATTCAGAAATTCCGAGTGGTGCAATCCTTGCAAACAATTGGAAGCCACGTTGTTGGGTTCTTAGGAGATGGAGTGAACGATTCACTGGCTTTAGATGCTGCCAATGTGAGCATTTCTGTGGACTCAGGTGTAGCCATTGCCAAAGACATGGCAGACATAATCTTACTTGAGAAAGACCTCAACGTGCTTATTGCAGGAGTGGAGCACGGTAGACTCACCTTTGTCAACACAATGAAGTACGTTAAGATGTCAGTGATTGCTAACTTGGGAAGTGTCATTTCACTTCTCATAGCAACAGTGTTGTTCAAGTATGAGCCCTTGACCTCTAGACAGCTTCTTACTCAGAATTTCATTTACAGTGTGGGACAGATTGCCATCCCTTGGGACAAGATCGATGAAGAGTATGTTAAGACACCTCATAAGTCCTCAGACAGAGGCTTGTCCATGTTCATAGTGTGGAATGGACCAGTGTGCACCCTTTGTGATGTGACAACACTCTTGTTTCTTTGGTTTTACTACGATGCTTACACTGATACATCTCACAAGTTTTTCCATTCAGCATGGTTCGTTGAAGGCCTCCTCTTACAGACCCTCATCATCCACTTGATAAGGACAGAGAAAATCCCTTTCATACAAGATGTTGCATCTTGGCCTGTGATTTTCTCCACTGTTGTGACATCTGCAATTGGAATTGCACTTCCATTCACACCCATTGGGAAGGTAATGGGATTCACCATTCTACCTCTCTCATATTTCGGATTTTTGGCACTTCTTTTTCTGGGGTATTTTATAGTTGGCCAGGTCCTACCGGGAGTCGAACCCAGGTCGCTGGATTCAAAGTCCAGAGTGCTAACCACTACACCATAG 2952 0.4157 MSTFYSNLQLCSTLFQLLLFSSSPINYLNAPPMGRTKVSTLFAHDNYMLPYYNPIRQTLVNRPNTQKDRFPFSLFGLLRRLIRSRKVDGGSKTEEEEKVYSWLYTLAQSHKNLVFEYVRSTERGLSFTEADRRLRENGPNVPLEYSFPRWWHLLWNALFHPFNIILIILSVLSFMTCDSSNGFIMLILVFISVTLRFYQEYNSSKAAIKLSEFVKCPIKVQRCAGRVVQTELIVQVDQRDVVPGDIVIFEPGDLFPGDIRLLSSKQLVVSQASLTGESCTTDKTADIREVLSTPLLDLKNICFMGTNVVSGTGKGLVISTGSNTYMSTMFSKVGKKKPPDDFEKGLRWIFYLIISVMLAVVTIMFVINYTTSLNLSESVLFAISVASALNPQMLPLIINTCLAKGALAMAKDRCIVKSLTSIREMGSMDILCIDKTGTLTINHAIMVNHLDCRGLPQEKVLRYAFLNSYFKSDQKYPLDDAILSFVYSNGFRFQPSKWSKIDEIPFDFIRRRVSVILETEDRNSQFLGRFMVTKGALLEVLKVCSFIENFDKDEISTFSSDDYQRILNLSEDLSNEGLRVIGVAIRKLKMVQTCERSNGSKGEEEDMERDMVFLGLITFFDPPKDSAKQALWRLSEKGVKAKVLTGDSLSLTTRVCREVGISTTHVITGPELEQLDQDTFHETVKRATVLARLTPIQKFRVVQSLQTIGSHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLIAGVEHGRLTFVNTMKYVKMSVIANLGSVISLLIATVLFKYEPLTSRQLLTQNFIYSVGQIAIPWDKIDEEYVKTPHKSSDRGLSMFIVWNGPVCTLCDVTTLLFLWFYYDAYTDTSHKFFHSAWFVEGLLLQTLIIHLIRTEKIPFIQDVASWPVIFSTVVTSAIGIALPFTPIGKVMGFTILPLSYFGFLALLFLGYFIVGQVLPGVEPRSLDSKSRVLTTTP 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12252g00002 983 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 466 479 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 774 789 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 929 950 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 362 381 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 824 837 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 879 900 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 345 361 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PRINTS Magnesium-transporting ATPase signature 844 860 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 Pfam Cation transporter/ATPase, N-terminus 117 173 IPR004014 -
Mupr12252g00002 983 SUPERFAMILY HAD-like 607 763 IPR036412 -
Mupr12252g00002 983 Gene3D - 429 753 IPR023214 -
Mupr12252g00002 983 SFLD Haloacid Dehalogenase 414 766 - -
Mupr12252g00002 983 Pfam haloacid dehalogenase-like hydrolase 428 730 - -
Mupr12252g00002 983 NCBIfam HAD-IC family P-type ATPase 185 478 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12252g00002 983 NCBIfam HAD-IC family P-type ATPase 682 795 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr12252g00002 983 NCBIfam magnesium-translocating P-type ATPase 96 965 IPR006415 GO:0015444|GO:0015693|GO:0016020
Mupr12252g00002 983 PANTHER CATION TRANSPORTING ATPASE 107 927 - -
Mupr12252g00002 983 Gene3D - 216 320 - -
Mupr12252g00002 983 SMART Cation_ATPase_N_a_2 105 178 IPR004014 -
Mupr12252g00002 983 SFLD p-type atpase 414 766 IPR044492 -
Mupr12252g00002 983 Gene3D - 181 928 - -
Mupr12252g00002 983 Pfam E1-E2 ATPase 226 411 - -
Mupr12252g00002 983 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 963 IPR023298 -
Mupr12252g00002 983 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 425 623 IPR023299 GO:0000166
Mupr12252g00002 983 SUPERFAMILY Calcium ATPase, transduction domain A 226 331 IPR008250 -
Mupr12252g00002 983 Gene3D - 444 620 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12252g00002 Mupr-Chr12252 6055 13912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12252g00002 123 881 Primary Pumps ATPases(2) AT1G10130 25.492 8.12e-65 235