Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12252g00001 ATGCCCCAAAATTCTCATTTACCATATATTGGTGCCACAATCTATGCTGAACAAACAAATGCAGCATTTTCCACATCCATAGAATACTTCACCTCCTCTGTTCCGTTCATGGCTCCTGTTCCTAAAAAGCAACCTCCTGAGAACCATGGTGTCCCAACACCTTCCCCTCATAAATCAGCAGTTCCAAATCCAGATTTAATTGTAAAGTCACAGCCAGTGAAGTTACCAGTACCCATCCTACCTTCACCAAAAGAACATCATAGGCATGTAATTCAAGTGGCGATGATTGGGATGGCATGCATGGTTGGCGTGGTTATGTTTCTCTGCACCGTGTCCGTTGTCATAAAGTACTTTTACTCAAGGAGATACAGGCGCAACCAAAACAGAAGACACACCCCTATACTGTTCGACGTCAACGGTAATTCTCCTACTTGGGATGATGACGTGGACGAAGACGAGGTAGCGGTTCTCCACCCCATATGGTACATCCGCACGGAGGGTCTCCAACAATCGCTCATAGATTCCATCACTGTCTTCAAATACCGAAAACAGGAAGGAATCGTAGACGGCACCGACTGTTCCGTTTGCCTCGGCGAGTTCCAACACGACGAGACTCTGCGACTCTTGCCCAAGTGCAGCCACGCTTTCCACATTCCTTGCATTGACACGTGGCTCCGCTCGCACAAAAACTGCCCCCTCTGTCGCGCACCTGTTGCCAACGACGCCGCGCAAATCAGAGCCGTTGATTCCAACGTTTCGGATCATCCGAGTCAAACCCTGCAGGTAGAGAATTCCGATCGCGAGAGCAGCGAAGTGAGGATTGAAGTGTCTCCGACGCAGCAGCGTCTCAGGAGGTCCGTTTCCGTGGATGATTTGTCTTCTGCTAATTCAACGGTAAATTTTGCTGATGTGGCGGTGGATTTAGATACACGCTTCGGTGAAAAACTGAATTCAAGCTTAGCGAAGCATGGTAGTGGAAGTTCAACGGCCATTCACAAGGAGCCAGAGTTCAACTCTTCCCTTGTGATGGAGGTCACGTTTAAGGAGACTTGCGCAAGTCCTGTGGTAATAAGGTCACGTTTAAGATCAATGGCTGTTGATGGAGGAAGACGAATGATTAGGATATGA 1128 0.4832 MPQNSHLPYIGATIYAEQTNAAFSTSIEYFTSSVPFMAPVPKKQPPENHGVPTPSPHKSAVPNPDLIVKSQPVKLPVPILPSPKEHHRHVIQVAMIGMACMVGVVMFLCTVSVVIKYFYSRRYRRNQNRRHTPILFDVNGNSPTWDDDVDEDEVAVLHPIWYIRTEGLQQSLIDSITVFKYRKQEGIVDGTDCSVCLGEFQHDETLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPVANDAAQIRAVDSNVSDHPSQTLQVENSDRESSEVRIEVSPTQQRLRRSVSVDDLSSANSTVNFADVAVDLDTRFGEKLNSSLAKHGSGSSTAIHKEPEFNSSLVMEVTFKETCASPVVIRSRLRSMAVDGGRRMIRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12252g00001 375 SUPERFAMILY RING/U-box 175 240 - -
Mupr12252g00001 375 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 84 242 IPR044675 -
Mupr12252g00001 375 SMART ring_2 193 234 IPR001841 -
Mupr12252g00001 375 CDD RING-H2_EL5-like 192 235 - -
Mupr12252g00001 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 244 IPR013083 -
Mupr12252g00001 375 ProSiteProfiles Zinc finger RING-type profile. 193 235 IPR001841 -
Mupr12252g00001 375 MobiDBLite consensus disorder prediction 41 63 - -
Mupr12252g00001 375 Pfam Ring finger domain 192 235 IPR001841 -
Mupr12252g00001 375 FunFam RING-H2 finger protein ATL54 168 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12252g00001 Mupr-Chr12252 3468 4675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12252g00001 154 333 C3H Transcription Factor Family AT4G33565 43.939 6.82e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12252g00001 - - gmx:102663026 330.872