Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12250g00005 ATGAATGCATACCTAGCCTTACCGTGTATTCTCTGTTTACTCAAACATGGTCTTCTGCCCCATCCGCGCTCGGGCTCCAAAACCTTCATATATATTCGAAACCCCAATATAATGTTACTATTATCAGCAGACATGATGAAGATTCTTTGTTCTTTCTTCTCTTGCTTCTCTTCATCCACCAACAACCAACAAAACAACATCGACTTCCCAGAGGGAGATCACCTGAACGATGGAACCTTTCGCTTATTCACTTACAACCAATTGAAATTAGCCACCCGTAATTTTCATTCCTCGGACAAGGTCGGAGAAGGTGGTTTCGGTTTTGTCTATAAGGGGAGGCTTGTGGATGGTTCTTTTGTGGCTGTAAAAGTGCTTGCGGTTGAGGTGGAATCCATGCGAGGAGAAAGAGAATTTGTGGCGGAATTGGCCACACTTGCAAACATCAGACACCAAAATCTTGTAAGCCTAAGAGGGTGTTGTGTCGAAGGAGTTCATAGATATTTAGTCTATGATTATATGGAGAACAACAGCCTTTACCACACTTTCTTAGCTTCGGAGGAGAGAAGGACGAGGTTCGATTGGGACACAAGGAGGGATGTATCCATAGGTGTGGCTCGTGGCCTTGTCTTTCTCCACGAGGAGATTAAGCCTCATATCGTACATAGAGACATCAAAGCCAAAAATATACTTCTTGATCGGAATTTCACACCAAAGGTTTCGGATTTCGGTTTGGCAAAATTGATGAGAGACGAAGCATCTTACATCAGCACTCGGGTTGCAGGGACATTGGGTTATCTAGCTCCGGAATATGCCAATTCTGGACAGGTTTCGCGAAAATCAGATGTTTATAGCTTTGGAGTGTTACTTTTGCAAATTGTAAGTGGCCTAGCAGTGGTGGATGCATATCAAGATATTGAACGTTTCATAGTGGAGAAGGCGTGGACAGCGTACCAAGCTAATGATTTATTAAAATTGGTGGATCCTGTGCTTAATATGAACTTCCCCGAGAACGAGGCCTTAAAATTCCTCGAGGTGGGGCTGCTTTGCGTACAAGAAACCGCGAAGCTTCGGCCACGAATGTCAGAGGTTGTAGACAAGTTGACCAACGACATTGATATGAGCGACGTTCACATTTCAAAACCCGGATTCGTTGCTGATCTCAGGAACATCAGAATCAAGCAACAAAACTTAAACTCCTCCCAGGAATCAAGTTCTGCTGGAGCAACATTTGCAAGCTCCATTTGGAGTTCGGCCAATCTTGCT 1263 0.441 MNAYLALPCILCLLKHGLLPHPRSGSKTFIYIRNPNIMLLLSADMMKILCSFFSCFSSSTNNQQNNIDFPEGDHLNDGTFRLFTYNQLKLATRNFHSSDKVGEGGFGFVYKGRLVDGSFVAVKVLAVEVESMRGEREFVAELATLANIRHQNLVSLRGCCVEGVHRYLVYDYMENNSLYHTFLASEERRTRFDWDTRRDVSIGVARGLVFLHEEIKPHIVHRDIKAKNILLDRNFTPKVSDFGLAKLMRDEASYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQDIERFIVEKAWTAYQANDLLKLVDPVLNMNFPENEALKFLEVGLLCVQETAKLRPRMSEVVDKLTNDIDMSDVHISKPGFVADLRNIRIKQQNLNSSQESSSAGATFASSIWSSANLA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12250g00005 421 SMART serkin_6 95 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12250g00005 421 Gene3D Transferase(Phosphotransferase) domain 1 173 379 - -
Mupr12250g00005 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mupr12250g00005 421 FunFam Serine/threonine-protein kinase receptor 64 172 - -
Mupr12250g00005 421 ProSiteProfiles Protein kinase domain profile. 95 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12250g00005 421 CDD STKc_IRAK 101 369 - -
Mupr12250g00005 421 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Mupr12250g00005 421 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 54 403 - -
Mupr12250g00005 421 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 173 371 - -
Mupr12250g00005 421 Pfam Protein kinase domain 95 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12250g00005 421 Gene3D Phosphorylase Kinase; domain 1 66 172 - -
Mupr12250g00005 421 SUPERFAMILY Protein kinase-like (PK-like) 79 379 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12250g00005 Mupr-Chr12250 16281 18041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12250g00005 83 411 Receptor kinase-like Gene Family AT1G53430 46.526 1.35e-91 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr12250g00005 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12250g00005 - - gmx:100813945 608.216