Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12249g00002 ATGGCAACAGAGAGACTATATATTGGCGTAGGCATAATGATTTCGTGGCAAAAGCAAAACAATATCAGAGTTCAGAAGCAGAAGGCTCCTCATGATTTTGTGAATACCCTTTTGCTTTCAACACAAGGGAAAATGGCTAGTTGTGGAAGGGAAGGTGTAGTGAGGCAGTATATAAGATCAAAGGTCCCTCGTTTAAGATGGACCCCTGAACTCCATCGTTGCTTTGTTTATGCCATTGAGACTCTTGGAGGTCATCACAAGGCTACTCCTAAGCTTGTTCTTCAAGTGATGGATGTTAAAGGGCTCACCATTTCGCACGTCAAGAGCCATCTCCAGATGTACAGAAGCATGAAAGGTGACTCCTGCAGACAAGATAGGACTTCCACCCAACATAGAAAACAATCTTTTCAGGAGCATGATGATGATGGACGTGTTGATGAAGTGAGTGATGTTGGTTTTCACTTAAAACCCATTGGAAAAGAATCTCATTCCCTCTCCAGCTCCACTAATTTCTCTCCAAAAAGAGCTAGAATCGAGAAGACAAGTTTACTCTCAGGAATCCTACAATGCAGCCAAAGAATATGTGAAGCTGTTCCAAATCCATACACTACTTTTTATGATTACCTGCAGAGCATGGGTGAGCAGAAGGGAATAAAGAAGATTTGTGTTGGTTCAATATGGCAGACTCCACCCCTTTCCACAACCTTTCCTATGCTACCAAAGCAAGAATCAGATTTGCTCCAGGTTGTTGACAAATTAAATGAAAAACAGCCTTTGAATGAAGTTGGGAACATTTGGAGGGTACGAGCAGAGGATGAAGACATGGGAGGTTGTGAGTTGTCATTGTCGATCTCATTGCCACAACCCCATCCTTCCTCTCAGAAAAGTAATGCTTCTTCAGTCAGTGAGACTAGTGAGGCATTTTCATTGTGCCCTGAGTTTAGCAACAACTACATGGCCTGTTCTAGTTCTTCTAATGTCCCAAACACAATTAATTTGGACCTATCTTTGGCCATTTGA 1020 0.4225 MATERLYIGVGIMISWQKQNNIRVQKQKAPHDFVNTLLLSTQGKMASCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQVMDVKGLTISHVKSHLQMYRSMKGDSCRQDRTSTQHRKQSFQEHDDDGRVDEVSDVGFHLKPIGKESHSLSSSTNFSPKRARIEKTSLLSGILQCSQRICEAVPNPYTTFYDYLQSMGEQKGIKKICVGSIWQTPPLSTTFPMLPKQESDLLQVVDKLNEKQPLNEVGNIWRVRAEDEDMGGCELSLSISLPQPHPSSQKSNASSVSETSEAFSLCPEFSNNYMACSSSSNVPNTINLDLSLAI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12249g00002 339 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 117 IPR006447 GO:0003677
Mupr12249g00002 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 119 IPR017930 -
Mupr12249g00002 339 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 57 170 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mupr12249g00002 339 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Mupr12249g00002 339 MobiDBLite consensus disorder prediction 119 144 - -
Mupr12249g00002 339 FunFam Myb family transcription factor 61 119 - -
Mupr12249g00002 339 Gene3D - 62 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12249g00002 Mupr-Chr12249 25534 30652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12249g00002 45 118 G2-like Transcription Factor Family AT1G14600 69.620 4.39e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr12249g00002 Myb_DNA-binding 2.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12249g00002 - - gmx:100810994 503.827