Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1223g00004 ATGAAGGAAGTGAGCGTGGTAGCAGTGATGTTGACGGCGGAGTTGTTGGACGTGATGGTCAATACTGTGAGCAAAGCAGCCATGAAGAAGGGCATGAATAACTTTGTATTCGTCATTTTCAGTAATCAGATGTTCAAGTTTTTTGGCATAGGTTACAGCTCTCCTACTTTGGCCTCAGCACTCTCTGATTTGATCCCGGCCTTTACCTTCATACTTGCCATCTTCTTCAGGATGGAAAAATTAGATTGGAAAGCTAACAGCACTCTGGCCAAGTCAATTGGCACGGTGGTATCAATTGCTGGGGCTTTGATAATATCTCTGTACAAAGGCCAGGCAGTCATAAATAATCATCCACCTTTGAAATTGTTCCCTCAAAAACTTGTCTCGTCTATGTCATTTGACTGGACACGGATAGTCAGAGAATACCCTGCTGAGCTGGTGGTGGTACTCATTCGCATTACATTAACCTCTATACTATCTGTTCCTGCTGCACTGATTTCAGTAAAGGATCTAAAAGCTTTGAGACTTGGATTTAATATGGAGCTGATAGCTATGGGATGTTCAGCAATTTTCGTCTTATCCTTTCGGAGTGTTATCCATACATGGGCCATGGGGAAGAGGGGTCCTGTCTATGTTGCAATGTTTATGCCACTTGAAATAGTCTTCGCATTCATCTTGGGGATTACTTTTCTTGGGGACTCTCTCTATATTGGAAGTGTGATCGGAGCAGCCATAGTAGTTATTGGTTTTTATGGTGTTATTGGGGGAAAATTCAAGAGAAGAAAAATTCCTTCATCGCCCAAACAGGACACCACAATGAAGGAATTGGTCGTGGTTGCAGCCCTGATGTCAATAGAGTTGTTGGACGTGATCGTCTACACTGTAAGCAAAGCAGCCATGAAGAAGGGCATGAATGACTGTGTGTTGGTCATGTACTCCAATGCCTTCGCAGCTTTCTTTATTCTTCCCTTAACCTTAATCTTTTATAGGAAAAGAGCTCTTCCACCACTCACATATCACATAGTTGGCCTGTTATTTCTTAATGGCTTGATAAGTTGCAGTGTTCAGATGCTCAGGTTTTTTGGAATAGGTTACAGTTCTCCTACTTTGGCCTCAGCAATGTCTGATTTAATCCCAGCTTTTACCTTCTTACTTGCCATCGTCTGCAGGATGGAAAAATTAAATTGGAAAGCTAATAGCACTCGGGCAAAGTCGATTGGCACATTTGTATCAATCAGTGGAGCCTTGATAATTTCTCTGTACAAAGGCCAGGCAATCATAAATAATCACCCTTCTAATAAATTGACACCTAAAATGCTTGTTTCATCTGAGCAATTTGACTGGATAATAGGGGCAGTGTTTCTTGCAGCTCATAGCTTTATTCTCTCATTTTTGTTTATACTTCAGACATGGATAATCCAAAATTACCCTGCAGAGCTGGTGGTAGTACTCACTCGCAGTACTATAGTGTCTTTGCTCTCTGTTCCAGCTTCGTTGATTTCAGAAAAGGATCCAAAAGCTTTGAGACTGGGATTTGATGTGCAGTTGCTGGCTATTGGATGTACAGCAATTTTCAGCGTATCGTTTCGAACTGTTACCCATATGTGGGTGATGAGAAGGAAGGGCCCTGTGTATGTTGCAATGTTTAAGCCAATTGGAATAGTGTTTGCGGTCATACTGGGTATTACGTTTCTGGGGGACTCTCTCTATCTTGGAAGTGTGATTGGAGCAGCAGTAGTGGTTATTGGTTTTTACGCCGTGATTTGGGGAAAAAGTCAAGAGAAAGCGGAGGAAGAGTGTCAAATCAATTCCTCTGCCGTGGACCCTCTTTTGCCCAACAAGACAATGGAGGATTAA 1857 0.4227 MKEVSVVAVMLTAELLDVMVNTVSKAAMKKGMNNFVFVIFSNQMFKFFGIGYSSPTLASALSDLIPAFTFILAIFFRMEKLDWKANSTLAKSIGTVVSIAGALIISLYKGQAVINNHPPLKLFPQKLVSSMSFDWTRIVREYPAELVVVLIRITLTSILSVPAALISVKDLKALRLGFNMELIAMGCSAIFVLSFRSVIHTWAMGKRGPVYVAMFMPLEIVFAFILGITFLGDSLYIGSVIGAAIVVIGFYGVIGGKFKRRKIPSSPKQDTTMKELVVVAALMSIELLDVIVYTVSKAAMKKGMNDCVLVMYSNAFAAFFILPLTLIFYRKRALPPLTYHIVGLLFLNGLISCSVQMLRFFGIGYSSPTLASAMSDLIPAFTFLLAIVCRMEKLNWKANSTRAKSIGTFVSISGALIISLYKGQAIINNHPSNKLTPKMLVSSEQFDWIIGAVFLAAHSFILSFLFILQTWIIQNYPAELVVVLTRSTIVSLLSVPASLISEKDPKALRLGFDVQLLAIGCTAIFSVSFRTVTHMWVMRRKGPVYVAMFKPIGIVFAVILGITFLGDSLYLGSVIGAAVVVIGFYAVIWGKSQEKAEEECQINSSAVDPLLPNKTMED 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1223g00004 618 Pfam EamA-like transporter family 450 588 IPR000620 GO:0016020
Mupr1223g00004 618 Pfam EamA-like transporter family 291 419 IPR000620 GO:0016020
Mupr1223g00004 618 SUPERFAMILY Multidrug resistance efflux transporter EmrE 36 109 - -
Mupr1223g00004 618 SUPERFAMILY Multidrug resistance efflux transporter EmrE 314 422 - -
Mupr1223g00004 618 PANTHER WAT1-RELATED PROTEIN 278 598 IPR030184 GO:0016020|GO:0022857
Mupr1223g00004 618 SUPERFAMILY Multidrug resistance efflux transporter EmrE 172 259 - -
Mupr1223g00004 618 SUPERFAMILY Multidrug resistance efflux transporter EmrE 513 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1223g00004 Mupr-Chr1223 30767 36532 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1223g00004 274 608 Nodulin-like Gene Family AT3G28050 42.012 4.71e-78 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1223g00004 - - gmx:100781718 521.546