Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12217g00001 ATGAGTATCATACTTAATATACTCTTTGTCTTTGTCCCTTCTCTTATAGTTTTCATAGCAGCAGACACATCATCCATTGCACAATCCCAATCCCTCAGTTATGGAAATACCTTAGTTTCCCCAAATGGAGTCTTTGAACTTGGTTTTTTCAACCTTGGAAATCCCAACAAAAGCTACCTCGCTATTCGCTACAAGAGTTATCATGATCAAACTTTTGTTTGGGTTGCAAACGGTGCCAATCCAATGAATGACACCTCAGCCAACTTGACACTAAACAGTTCTGGCAGTTTGGTCCTTACACACAATAACAAGGATGTTTGGAACACAAGTTCTTCAAAAGAAGTACAGAAGATTAATCTAGTGGCAGAGCTATTAGACACTGGCAACCTTGTGATAAGAGAGAAGAATAATGAAGCAGGGGCAGAAGAGGAAGAATATTTGTGGCAAAGCTTTGAGCACCCTTGTAATACAATGTTGGCTGGGATGAAGATTGGATGGGACCTTAAAAGGAAACTAAATAGAAGTCTCATAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGATTTATCATGGGGTATTGTGTTGCATCCCTATCCTGAGATGTATATGATGCAGGGAACAAGAAAACACCACAGACTTGGACCGTGGAATGGCTTGCGTTTCAGTGGCATGCCAGAAATGAGGTACAATCCTGTTTTCAATTACACGTTTGTCTCCAACAATGAAGAGGTTTCTTACATGTGGACCCTGCAGACTAGCTTAATAACAAAAGTGATACTAAACCAATCCACAGAACAACGTCCTCGCTATGTGTGGTCCGACACTATAAAATCTTGGAGCTTTTATTCAACCATGCCAGGAGACGTCTGTGACTATTATGGGCAATGTGGCGCCAATTCATATTGCAGCAGTACTGCATCACCAATGTGTGAGTGCTTACGAGGGTTCCAGCCTAAGTCTCTTGAAAATTGGACCTCAATGGTCTGGGACCAAGGATGTTCCCTCAAACATAATTTGACTTGCAACAATGATGGCTTTGCACTTGTGGATGGCTTGAAAGTGCCAGATACTCAAAATACTACTGTGGATGAGACTATTGATCTTGAGCAGTGCAGAACCAAGTGCTTGAATAGTTGTTCCTGCATGGCATATACAAATTCAAATATAAGTGGAACAGGCAGTGGATGTGTCATGTGGTTTGGTGATTTAATTGACATCAAACTGTATGCAGATCCACAAGGTGGGCAGAGTCTATTCATAAGGTTGCCTCCTTCTGAATTAGATTCTGACCGGCACAAGAAGTCAAAAATAACATTTGTAGTCTCCGTTGCTGCAGCTATAGGACTTATACTTGCTATTTATTTTATCTACAGAAGGAAAATTTCTGAGAAGTCAAAGGCCGAAAATATCTACGAAAGTTATGTGGATGATCTGGATCTCCCACTGCTTGATTTGTCAATAATAATTGCAGCCACTAAAAACTTCTCAAAGGGGAACCAGATTGGAGAAGGTGGCTTTGGACCCGTGTATTGGGGAAAATTAGCCAGTGGACTAGAAATTGCTGTGAAGAGACTTTCAAAGAACTCGAATCAAGGAATGAGTGAGTTCGTAAATGAAGTTAAACTGATTGCAAAAGTTCAACACCGAAATCTTGTGAAGCTTCTTGGCTGTTGCATTCAAAAGCAAGAAAAAATGCTAGTCTATGAATACATGATTAACGGCAGCCTTGACTACTTCATTTTTGTTGCTATGAATAATACCACAGATAGTACCAAAGGAAAATTGCTAGATTGGCCAAAGCGTTTTCACATCATTTGTGGAATTGCTCGAGGACTTATGTACCTTCATCAAGATTCTCAGTTGAGGATTGTTCATAGAGATCTCAAAGCAAGTAATGTTTTATTAGATAATGCTTGGAATCCCAAAATATCTGATTTTGGAACGGCCAAAACTTTTGGAGGAGAAGATATTGAAGGAAACACAAATAGAATTGTTGGAACATAG 2007 0.4006 MSIILNILFVFVPSLIVFIAADTSSIAQSQSLSYGNTLVSPNGVFELGFFNLGNPNKSYLAIRYKSYHDQTFVWVANGANPMNDTSANLTLNSSGSLVLTHNNKDVWNTSSSKEVQKINLVAELLDTGNLVIREKNNEAGAEEEEYLWQSFEHPCNTMLAGMKIGWDLKRKLNRSLIAWKSDDDPTPGDLSWGIVLHPYPEMYMMQGTRKHHRLGPWNGLRFSGMPEMRYNPVFNYTFVSNNEEVSYMWTLQTSLITKVILNQSTEQRPRYVWSDTIKSWSFYSTMPGDVCDYYGQCGANSYCSSTASPMCECLRGFQPKSLENWTSMVWDQGCSLKHNLTCNNDGFALVDGLKVPDTQNTTVDETIDLEQCRTKCLNSCSCMAYTNSNISGTGSGCVMWFGDLIDIKLYADPQGGQSLFIRLPPSELDSDRHKKSKITFVVSVAAAIGLILAIYFIYRRKISEKSKAENIYESYVDDLDLPLLDLSIIIAATKNFSKGNQIGEGGFGPVYWGKLASGLEIAVKRLSKNSNQGMSEFVNEVKLIAKVQHRNLVKLLGCCIQKQEKMLVYEYMINGSLDYFIFVAMNNTTDSTKGKLLDWPKRFHIICGIARGLMYLHQDSQLRIVHRDLKASNVLLDNAWNPKISDFGTAKTFGGEDIEGNTNRIVGT 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12217g00001 668 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Mupr12217g00001 668 FunFam Os07g0541700 protein 572 668 - -
Mupr12217g00001 668 SMART serkin_6 496 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12217g00001 668 SMART blect_4 29 154 IPR001480 -
Mupr12217g00001 668 SMART ntp_6 342 423 IPR003609 -
Mupr12217g00001 668 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 657 - -
Mupr12217g00001 668 Gene3D - 16 151 IPR036426 -
Mupr12217g00001 668 Gene3D Transferase(Phosphotransferase) domain 1 572 668 - -
Mupr12217g00001 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 151 - -
Mupr12217g00001 668 ProSiteProfiles Protein kinase domain profile. 496 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12217g00001 668 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 185 IPR036426 -
Mupr12217g00001 668 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Mupr12217g00001 668 SUPERFAMILY Protein kinase-like (PK-like) 484 668 IPR011009 -
Mupr12217g00001 668 FunFam receptor-like serine/threonine-protein kinase SD1-8 466 571 - -
Mupr12217g00001 668 CDD B_lectin 29 154 IPR001480 -
Mupr12217g00001 668 Pfam D-mannose binding lectin 71 180 IPR001480 -
Mupr12217g00001 668 Pfam PAN-like domain 342 407 IPR003609 -
Mupr12217g00001 668 CDD PAN_AP_plant 338 424 - -
Mupr12217g00001 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mupr12217g00001 668 Pfam Protein tyrosine and serine/threonine kinase 498 653 IPR001245 GO:0004672|GO:0006468
Mupr12217g00001 668 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Mupr12217g00001 668 Gene3D Phosphorylase Kinase; domain 1 457 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12217g00001 Mupr-Chr12217 6518 9054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12217g00001 438 668 Receptor kinase-like Gene Family AT4G23190 52.814 3.03e-73 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr12217g00001 PK_Tyr_Ser-Thr 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12217g00001 - - gmx:100810407 1056.59