Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr12213g00004 | ATGGGAGCAGTGAGTGATGGAAGCCGCAGCAGAAAGAAGACATCATCAAGAGGGCACCACAGGTTCGTGGGGGTTCGACAAAGGCCATCAGGGAGATGGGTGGCAGAGATCAAAGACTCTCTACAAAAGGTTAGGCTTTGGCTTGGAACATTCGACACTGCCGAGGATGCAGCTCGAGCATATGACAGTGCTGCTAGAGCCTTGAGAGGTGCCAATGCCAGAACCAACTTTGAATTGCCTGAGTCAGCAACTTGTGGTGGTGCTTCTAAGCGTGTTGGTGGGGATGGTGGTTCCAACTTTGTGCCTAATTGTACCGAACCCTTTTCTTTTGAGGATGTCAATGAGCCTGGTGCAGATGCAGAAGGCCTTCTTGGTGCACTTAAGGCCAAGCTGCTTGATGGAAAGAAAGGCAAGTTTCACTTTCCATTTCTTGCTCATTGTGCTGCCCCTGTTGTTCAATCTAGCATGGTTTCAAGACCAACCACTCATGGGAAGAAAGAGTTATTATTACCATCTTCAGCTAATAATACTCTCCTTTCAAACACTTGTGATAAGAGTGTGGTTGTCCCGAATCATGATCATGAAGGTGCTGTAGTGAGCAGTGGTAGAGTCAACTCTCATAGTCAACTTTGCCAAACCCCACCTGTGGCAAGCATGGCATGGCCCAATGAAGTGGCATATGAATTGTCTTGGCCTACACACGTGAGCCAAGTTCCTGATAATAGCCTGCTTGCATCTGCCAGTGCAGCAGCCACCATGACATGGCCACTTTCTGGGGCAATTGATCATTCCACTGTTGATATGACATGCACAGATGAGGGAGCATCAAGTAATAGCAACAAAAGTGGCCAAATGATGAATATGGTCAGCATGCAGTTGCCTATAGTTGGTGGTGCAACTGAAGGCCTTTGGACACTGCAAGAGCAGCAACAATTTCTGCAATGTGACAACAACACTTGGTTTAGTTTTAATGGCTCTTGGGATCCTCTCCTCTATGTGCCCTCAGAGCTAGCGTGA | 1017 | 0.4769 | MGAVSDGSRSRKKTSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDSAARALRGANARTNFELPESATCGGASKRVGGDGGSNFVPNCTEPFSFEDVNEPGADAEGLLGALKAKLLDGKKGKFHFPFLAHCAAPVVQSSMVSRPTTHGKKELLLPSSANNTLLSNTCDKSVVVPNHDHEGAVVSSGRVNSHSQLCQTPPVASMAWPNEVAYELSWPTHVSQVPDNSLLASASAAATMTWPLSGAIDHSTVDMTCTDEGASSNSNKSGQMMNMVSMQLPIVGGATEGLWTLQEQQQFLQCDNNTWFSFNGSWDPLLYVPSELA | 338 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr12213g00004 | 338 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 16 | 164 | - | - | |
Mupr12213g00004 | 338 | SMART | rav1_2 | 21 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | CDD | AP2 | 21 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | Gene3D | AP2/ERF domain | 20 | 79 | IPR036955 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | ProSiteProfiles | AP2/ERF domain profile. | 21 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | FunFam | ethylene-responsive transcription factor RAP2-11 | 20 | 79 | - | - | |
Mupr12213g00004 | 338 | Pfam | AP2 domain | 21 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | PRINTS | Ethylene responsive element binding protein signature | 22 | 33 | IPR001471 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | PRINTS | Ethylene responsive element binding protein signature | 44 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
Mupr12213g00004 | 338 | SUPERFAMILY | DNA-binding domain | 22 | 78 | IPR016177 | GO:0003677 | |
Mupr12213g00004 | 338 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr12213g00004 | Mupr-Chr12213 | 18758 | 19774 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr12213g00004 | 9 | 77 | AP2-EREBP Transcription Factor Family | AT5G19790 | 67.143 | 1.05e-26 | 104 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Mupr12213g00004 | AP2 | 2.4e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr12213g00004 | - | - | gmx:102661478 | 465.692 |