Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12213g00004 ATGGGAGCAGTGAGTGATGGAAGCCGCAGCAGAAAGAAGACATCATCAAGAGGGCACCACAGGTTCGTGGGGGTTCGACAAAGGCCATCAGGGAGATGGGTGGCAGAGATCAAAGACTCTCTACAAAAGGTTAGGCTTTGGCTTGGAACATTCGACACTGCCGAGGATGCAGCTCGAGCATATGACAGTGCTGCTAGAGCCTTGAGAGGTGCCAATGCCAGAACCAACTTTGAATTGCCTGAGTCAGCAACTTGTGGTGGTGCTTCTAAGCGTGTTGGTGGGGATGGTGGTTCCAACTTTGTGCCTAATTGTACCGAACCCTTTTCTTTTGAGGATGTCAATGAGCCTGGTGCAGATGCAGAAGGCCTTCTTGGTGCACTTAAGGCCAAGCTGCTTGATGGAAAGAAAGGCAAGTTTCACTTTCCATTTCTTGCTCATTGTGCTGCCCCTGTTGTTCAATCTAGCATGGTTTCAAGACCAACCACTCATGGGAAGAAAGAGTTATTATTACCATCTTCAGCTAATAATACTCTCCTTTCAAACACTTGTGATAAGAGTGTGGTTGTCCCGAATCATGATCATGAAGGTGCTGTAGTGAGCAGTGGTAGAGTCAACTCTCATAGTCAACTTTGCCAAACCCCACCTGTGGCAAGCATGGCATGGCCCAATGAAGTGGCATATGAATTGTCTTGGCCTACACACGTGAGCCAAGTTCCTGATAATAGCCTGCTTGCATCTGCCAGTGCAGCAGCCACCATGACATGGCCACTTTCTGGGGCAATTGATCATTCCACTGTTGATATGACATGCACAGATGAGGGAGCATCAAGTAATAGCAACAAAAGTGGCCAAATGATGAATATGGTCAGCATGCAGTTGCCTATAGTTGGTGGTGCAACTGAAGGCCTTTGGACACTGCAAGAGCAGCAACAATTTCTGCAATGTGACAACAACACTTGGTTTAGTTTTAATGGCTCTTGGGATCCTCTCCTCTATGTGCCCTCAGAGCTAGCGTGA 1017 0.4769 MGAVSDGSRSRKKTSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDSAARALRGANARTNFELPESATCGGASKRVGGDGGSNFVPNCTEPFSFEDVNEPGADAEGLLGALKAKLLDGKKGKFHFPFLAHCAAPVVQSSMVSRPTTHGKKELLLPSSANNTLLSNTCDKSVVVPNHDHEGAVVSSGRVNSHSQLCQTPPVASMAWPNEVAYELSWPTHVSQVPDNSLLASASAAATMTWPLSGAIDHSTVDMTCTDEGASSNSNKSGQMMNMVSMQLPIVGGATEGLWTLQEQQQFLQCDNNTWFSFNGSWDPLLYVPSELA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12213g00004 338 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 16 164 - -
Mupr12213g00004 338 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Mupr12213g00004 338 CDD AP2 21 78 IPR001471 GO:0003700|GO:0006355
Mupr12213g00004 338 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Mupr12213g00004 338 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Mupr12213g00004 338 FunFam ethylene-responsive transcription factor RAP2-11 20 79 - -
Mupr12213g00004 338 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Mupr12213g00004 338 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Mupr12213g00004 338 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Mupr12213g00004 338 SUPERFAMILY DNA-binding domain 22 78 IPR016177 GO:0003677
Mupr12213g00004 338 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12213g00004 Mupr-Chr12213 18758 19774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12213g00004 9 77 AP2-EREBP Transcription Factor Family AT5G19790 67.143 1.05e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr12213g00004 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12213g00004 - - gmx:102661478 465.692