Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12204g00001 ATGGTATTCATTTCTCATTCATTTGGAATTGGTCTTGTGGTCTTGGTTGAGTCAATTTCAAGTCTTCCATTCCCTTTCAGTGACGTGAAGCTCGCTTTGTTGAAAATGGGTGCTGTTGGTAATGTTCTCCAATCAGAATTGGAGTTTACCTCGGCTGCTGCTGCCAATCCTGTAGTTGGGTCCCATATTTGGGTGGAGGATCCCGATGTGGCTTGGATAGATGGGGAGGTCTTGGAGGTTAAAGGAGAAGGAATTAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCAGTATTTATCATAAAGATACCGAAGTCCCACCAAGTGGAGTGGATGATATGACAAAGCTAGCATACCTGCATGAACCTGGAGTACTAGATAATCTGAGATCAAGATATGATATAAATGAAATTTATACTTACACTGGGAATATATTGATCGCTGTGAACCCTTTCATAAAGCTCCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGCTTTTGGTGAGCTAAGTCCACATCCCTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATGAATGAAGGAATCAGTCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCTGGTAAAACAGAAAGTACTAAGTTACTCATGCGGTATCTTGCTTACATGGGTGGGAGGGCTGCTGCTGCTGAAGGTAGAACTGTTGAGCAAAAGGTTCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCGAAGACCGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGAATTTCAGGAGCTGCTATCAGGACTTATCTACTTGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAACTATCATTGTTTCTACATGCTCTGTGCTGCACCTCCGGAGGATATTAAAAAGTACAAATTAGAAGATCCAAGATTGTTTCATTATCTGAATCAATCAAATTGCTTTGAGTTGGAAGGGCTTGATGAATCTAAAGAATACAGGGAGACAAGGAGAGCAATGGATATTGTTGGGATAAGTTCTGAGGAGCAGGATGCAATATTTAGAGTTGTTGCTGCAATTTTGCATCTCGGTAACATTGAATTTGTGAAAGGGAAGGAGATAGATTCATCTATGCCCAAAGATGAAAAATCTAGGTTCCATCTACAGACTGCAGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACAATTACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCCTTGGCTAAGATTGTGTACACAAGATTGTTTGACTGGTTGGTTGATAAAATTAATAGTTCTATTGGTCAAGACCCTGAGTCAAAATCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTCCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTGTGGACAATCAAGATATTCTGGATCTCATTGAAAAGGTTTTCCCTTCTAACTCTGCAATCCTTTTTATGTTTCCTAGATCTACACATGAAACTTTTGCCCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCTAAATTATCACGCAGTGACTTCACAATTTGCCATTATGCTGGAGATGTCACTTATCAAACTGAACTTTTCCTCGACAAGAACAAAGATTATGTTGTTGCAGAGCACCAGGCACTTCTTTATGCTTCCAAATGCCCCTTCGTATCGGGCTTGTTTCCCCCTTCAACCGAGGAGTCTTCTAAACAATCAAAGTTCTCCTCAATAGGTTCACGATTTAAGCAACAATTGCAATCTTTACTTGAAACTCTCAGTGCCACTGAGCCTCACTACATTCGTTGTGTAAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAGAATGTTTTGCTGCAACTACGTTGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCTGGGTATCCTACCAGAAAAACCTTCGATGAATTTGTGGATCGATTTAGCCTTCTTGCACCCGAAGCATTGGATGGAAGTTCCGACGAGGTCACTGCTTGCAAGAGGATTCTAAAGAATGTTGGACTTGAAGGCTATCAGATTGGCAAGACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATATCCGTAGAAGTGAGATCTTAGGAAAGTCAGCAAGCATTATTCAAAGGAAAATTCGTTCTTATTTGGCCCGCCAAAGTTTTGTCATGCTTCGTTTGTCTGCTATGCAGATTCAAGCTGCGTGCAGAGGACAACTTGCTCGGCAAGTTTACAAGGGAATGCGACAGGAGGCTTCTAGTCTGGTGATTCAAAGGTGCTTCCGCATGCATAATTCTAGGAAGGCATACAAAGATTTGTATACCTCTGCTGTCTCTATCCAGACTGGTATGCGGGGGATGGCTGCTCGTTGTGAGCTACACTTTAGAAGGCAGACTAAAGCAGCAACTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACAATTTCATTTCAGAAAATTAAAGAAGGCAGCAATTTTAACACAATGTGCATGGAGAGGAAAAGCTGCTAGGCGAGAATTGCGAAATCTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCCAAGAGTAAGCTTGAAAAGCAAGTTGAAGACCTTACATTAAGGTTGCAGCTGGAAAAACGTTTGAGGGTTGACATCGAAGAAGCGAAAGCACAAGAAAATCAAAGATTACAATCTGCTTTGCAAGAGATGCAACATCAGTTTAAAGAAACTAAATTACTTCTTGAAAAGGAGCGGGAGGCTACAAAAATAGCAGCAGCAGAGAGAGTGCCTATCATACAGGAGGTTCCAGTTGTTGACCATGCTTTGTTGGAGAAGCTCAGTAGTGAGAATGAGAAACTCAAGAACTTGGTGAGTTCTCTGGAAAAGAAAATTGATGAAACTGAAAAAAGGTATGAAGAGGCAAGCAGAATTGGTGAAGAAAGGTTGAAGCAAGCATTGGATGCAGAGTCAAAAATAGTCCAGTTGAAGACTTCTATGCAAAGGCTTGAAGAGAAATTCATAGACATGGAATCTGCAAACCATATTCTTCAGAAACAATCTCTACTAAACTCATCTGTGAAAACAATAGCAGAACACCTGTCCTCGCCAGTGGCCGAGAAGTTAGAAAATGGTCACCACGTGGCAGAAGAGCAGAAAGCTGTTGATACATGTGTTACACCTGTGAAAAAATTTGGTACAGAATCTGACACTAAATTGAGGAGATCTTACATGGAGCGACAACATGAGAGTGTTGATTCACTTGTCAACTGTGTTATGAAAAATATTGGCTTCAACCATGGAAAACCCATTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTTGATCGCCTTATCCAAATGATTGGTTCTGAAATCGAGAATCAAGATGGCAATGATCATATGGCCTATTGGCTGTCAAATACATCTGCATTGTTGTTTTTACTTGAACAAAGCCTGAAATCTGGGGGTTCAGCAAATGCTACCCCAGTTAGAAAGCCACCTAATCCAACATCTCTCTTTGGAAGAATGACTATGGGTTTTCTTTCGTCCCCTTCTTCTGCCAGCCTTGCCACTCCTCCATTGGATGTTGTGCGCAAGGTGGAGGCTAAATACCCTGCTTTGCTTTTCAAGCAGCAGCTCACAGCCTATTTGGAGAAAATATATGGCATCATTCGGGATAATTTGAAGAAGGATTTAACACCAGTTCTTGCATTATGCATCCAGGCACCAAGAACATCAAAGGGAGGGTTACGTTCTGGTCGATCCTTTGCTAAAGATTCCCCAATGGTTCACTGGCAGAGTATTATCGAATCCCTCAATACCCTCCTCTGTACACTGAAAGAGAACTTTGTGCCTCCAGTTCTTATCCAAAAGATCTTCAGTCAAACATTCTCGTATATTAATGTGCAACTCTTCAATAGTCTTCTTCTTCGTCGCGATTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAGTTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGCGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCTTATGATGAAATCATCAATGATTTATGCCCTATATTGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGGTAACTACAATACTCGAAGTGTATCTCCAGATGTGCTTTCGAGCATGAGGATGCTAATGGCTGAGGACTCCAATGATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTGGATGATCTCTCTACATCACTGCAAGAGAAGGACTTCTCAGATATGAAACCAGCGGACGAGCTTCTCGAGAATCCAGCCTTCCAATTTTTGAATGACTTAGTATGCTTCTATAATTGTCTTCTCAAGGTAGACAACAAAATCAGTTGTTGGTCCTTGCCATCGGTGGTTCATTCAATTGTAAAATATTCGTTGCTTATAGAGGCA 4788 0.4117 MVFISHSFGIGLVVLVESISSLPFPFSDVKLALLKMGAVGNVLQSELEFTSAAAANPVVGSHIWVEDPDVAWIDGEVLEVKGEGIKVLCTSGKTVVVKASSIYHKDTEVPPSGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMMNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIKKYKLEDPRLFHYLNQSNCFELEGLDESKEYRETRRAMDIVGISSEEQDAIFRVVAAILHLGNIEFVKGKEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINSSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKVFPSNSAILFMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSTEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEVTACKRILKNVGLEGYQIGKTKVFLRAGQMADLDIRRSEILGKSASIIQRKIRSYLARQSFVMLRLSAMQIQAACRGQLARQVYKGMRQEASSLVIQRCFRMHNSRKAYKDLYTSAVSIQTGMRGMAARCELHFRRQTKAATVIQSHCRKYLAQFHFRKLKKAAILTQCAWRGKAARRELRNLKMAARETGALQAAKSKLEKQVEDLTLRLQLEKRLRVDIEEAKAQENQRLQSALQEMQHQFKETKLLLEKEREATKIAAAERVPIIQEVPVVDHALLEKLSSENEKLKNLVSSLEKKIDETEKRYEEASRIGEERLKQALDAESKIVQLKTSMQRLEEKFIDMESANHILQKQSLLNSSVKTIAEHLSSPVAEKLENGHHVAEEQKAVDTCVTPVKKFGTESDTKLRRSYMERQHESVDSLVNCVMKNIGFNHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQDGNDHMAYWLSNTSALLFLLEQSLKSGGSANATPVRKPPNPTSLFGRMTMGFLSSPSSASLATPPLDVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLKKDLTPVLALCIQAPRTSKGGLRSGRSFAKDSPMVHWQSIIESLNTLLCTLKENFVPPVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAASSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDGNYNTRSVSPDVLSSMRMLMAEDSNDAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFLNDLVCFYNCLLKVDNKISCWSLPSVVHSIVKYSLLIEA 1596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12204g00001 1596 ProSiteProfiles IQ motif profile. 902 931 IPR000048 GO:0005515
Mupr12204g00001 1596 Gene3D - 490 671 - -
Mupr12204g00001 1596 FunFam Myosin 2 363 481 - -
Mupr12204g00001 1596 FunFam unconventional myosin-Va 881 929 - -
Mupr12204g00001 1596 ProSiteProfiles Dilute domain profile. 1205 1506 IPR002710 -
Mupr12204g00001 1596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 836 931 IPR027417 -
Mupr12204g00001 1596 SMART MYSc_2a 106 781 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 833 IPR027417 -
Mupr12204g00001 1596 Pfam IQ calmodulin-binding motif 834 852 IPR000048 GO:0005515
Mupr12204g00001 1596 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Mupr12204g00001 1596 Pfam IQ calmodulin-binding motif 809 827 IPR000048 GO:0005515
Mupr12204g00001 1596 Pfam IQ calmodulin-binding motif 904 923 IPR000048 GO:0005515
Mupr12204g00001 1596 Pfam IQ calmodulin-binding motif 880 896 IPR000048 GO:0005515
Mupr12204g00001 1596 Coils Coil 1063 1097 - -
Mupr12204g00001 1596 CDD MyosinXI_CBD 1156 1529 IPR037975 GO:0007015
Mupr12204g00001 1596 Gene3D - 881 930 - -
Mupr12204g00001 1596 Gene3D - 783 832 - -
Mupr12204g00001 1596 Gene3D - 833 880 - -
Mupr12204g00001 1596 SMART iq_5 830 852 IPR000048 GO:0005515
Mupr12204g00001 1596 SMART iq_5 901 923 IPR000048 GO:0005515
Mupr12204g00001 1596 SMART iq_5 853 875 IPR000048 GO:0005515
Mupr12204g00001 1596 SMART iq_5 805 827 IPR000048 GO:0005515
Mupr12204g00001 1596 SMART iq_5 782 804 IPR000048 GO:0005515
Mupr12204g00001 1596 SMART iq_5 878 900 IPR000048 GO:0005515
Mupr12204g00001 1596 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Mupr12204g00001 1596 Gene3D Myosin VI head, motor domain, U50 subdomain 363 649 - -
Mupr12204g00001 1596 CDD MYSc_Myo11 126 768 IPR036018 -
Mupr12204g00001 1596 ProSiteProfiles IQ motif profile. 785 812 IPR000048 GO:0005515
Mupr12204g00001 1596 Coils Coil 1021 1055 - -
Mupr12204g00001 1596 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Mupr12204g00001 1596 Gene3D - 714 781 - -
Mupr12204g00001 1596 Gene3D Kinesin motor domain 115 710 IPR036961 -
Mupr12204g00001 1596 ProSiteProfiles Myosin motor domain profile. 112 780 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Mupr12204g00001 1596 Pfam DIL domain 1382 1484 IPR002710 -
Mupr12204g00001 1596 Pfam Myosin head (motor domain) 114 768 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 PRINTS Myosin heavy chain signature 142 161 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 PRINTS Myosin heavy chain signature 199 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 PRINTS Myosin heavy chain signature 247 274 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 PRINTS Myosin heavy chain signature 533 561 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 Pfam Myosin N-terminal SH3-like domain 60 102 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 Coils Coil 939 998 - -
Mupr12204g00001 1596 FunFam Myosin heavy chain 303 358 - -
Mupr12204g00001 1596 Gene3D - 303 361 - -
Mupr12204g00001 1596 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 58 107 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr12204g00001 1596 FunFam Myosin XI D 783 832 - -
Mupr12204g00001 1596 ProSiteProfiles IQ motif profile. 879 905 IPR000048 GO:0005515
Mupr12204g00001 1596 PANTHER MYOSIN 108 1494 - -
Mupr12204g00001 1596 SMART DIL_2 1381 1488 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12204g00001 Mupr-Chr12204 33 27569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12204g00001 53 1559 Myosins gene family AT5G43900 74.257 0.0 2313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12204g00001 K10357 - gmx:100795648 2771.5