Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12203g00001 TATAGCGTACCAATTCGTTTTCATCATTCTCAATTGCAAAGATCTTTCGATTTTCTCACCGGAGCTGTAGTGCAACGAGCTAGATCCGGAGCCAGCGCGAGATTTTCGATCCGATCAATATATCGCAAATGGTATCAATTTCTCGCTCTTCTGTTTTTTATTTTGGTCACCGTCGAGTCAATTCGAAGTCATAAGGCATTGGGTACAAATAGGGGTACAGGATACAAGAATTTAAAAAAATCTAGGATGCGGGCTGCCGCTGCCAAACCTGTAGTTGGTTCCCATGTTTGGGTGGAGGATTCTCAAGTAGCTTGGATAGATGGTGAGGTCTTGGAGGTTAAGGGGGAAGAAATCAAAGTCCTTTGCGCTTCAGGGAAGACGGTTGTTGTTAAAGCTTCTAGTGTTTATCATAAAGATACCGAAGCCCCACCATGTGGAGTGGATGATATGACAAAGCTTGCTTATCTTCATGAACCTGGTGTCCTGAGTAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACTGGGAATATATTGATTGCTGTGAATCCTTTCATAAAGCTTCCTCATTTATACGATAGCCACATGATGGCACAATATAAAGGAGCAGGTTTTGGAGAGCTAAGTCCACATCCTTTTGCTGTTGCAGATGCAGCATACAGACTTATGATTAATGAGGGAATCAGCCAGTCAATACTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACCAAATTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAACTAATAATGCTGCAGAAGGTAGAACTGTTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAAAGGAAGAATTTCTGGGGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAACTATCACTGTTTCTATATGCTCTGTGCTGCACCTCCGGAGGATATTCAGAAGTACAAATTAGGAAATCCTAGAACATTTCATTATCTAAATCAATCAAATTGCTATGAGTTGGAAGGGGTTGATGAGTTTAAAGAATATTGTGATACGAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCAAGTGGTTGCTGCAATTTTGCATCTTGGCAATATTGAATTTACAAAAGGGAAAGAAATTGACTCATCTGTGCCCAAAGATGAAAAATCTTGGTTCCATCTACGAACTGCTGCCGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATAACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGTCGAGATGCTTTGGCTAAGATTGTGTACACGAGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGACCCTGATTCAAAGTCCTTAATTGGAGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATCAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAGTTTGTTGACAATAAAGATATTCTGGATCTCATTGAAAAGATAGCTGTATGTTATGCATTTTGCAGTATGTTTCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGTCACGTAGTGACTTCACAATTTGCCATTATGCGGGTGATGTCACTTATCAAACTGAATTGTTCCTAGACAAGAACAAAGATTACGTTGTTGCAGAACACCAGGCACTTCTTTATGCTTCCAAATGCTCCTTTGTATCTGGTTTGTTCCTCCCCTCACCTGAGGAATCGTCCAAACAATCAAAGTTCTCTTCAATAGGCTCCCGGTTTAAGCAACAACTGCAATCACTACTTGAAACTCTCAGTGCCACTGAGCCGCACTACATTCGCTGTGTTAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTTTGCAGCAACTACGGTGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCCGGGTATCCCACTAGGAAAACTTTTGATGAATTTGTGGATCGATTTGGACTTCTTGCACCTGAAGCTTTGGATGGGAGTTCTGACGAGGTCACTGCTTGCAAGAGGATTCTGGTGAAGGTTGGACTTGAGGGCTATCAGATTGGTAAAACAAAAGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATACTCGTAGAAGTGAGGTCTTAGGAAAGTCGGCAAGCATTATTCAGAGGAAAGTTCGTACCTATTTGGCCCGCCGAAGTTTTGTCTCGATACGTTTGTCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTACGAGGGATTGCGGCAGGAGGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATGTTGCTAGGAAAGCATATACAGAATTGTATAGCTCAGCTGTTTCTATTCAGACTGGTATGCGAGGGATGGCTGCTCGTAGCGAGCTACGCTTCAGGAAGCAAACTAGTGCTGCTATTGTCATTCAGAGCCACTGCCGGAAATACCTGGCACAACATCATTTTACAAACTTAAAGAAGGCAGCAATTATAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGTGAGTTACGAAATCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTTCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGCTTGAGGGTCGACATTGAAGAATCAAAAACAAAAGAAAATGAAAAATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTCAAAGAAACTAAGTTATTACTTCAAAAGGAGCGTGAGGCTGCAAAAAGAGAGGCTGAGAGAGCGCCTGTCATACAGGAGGTTCCTGTTGTTGACCATGATTTGTTGGAGAAGCTCACTAGCGAAAATGAGAAGCTCAAGACCTTGGTGAGTTCATTGGAAAAGAAAATTGATGAAACAGAAAAAAGATATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAGGCTTTGGATGCTGAATCAAAAATAATCCAGTTGAAGACTTCTATGCAAAGGCTCGAAGAGAAATTCTCAGATATGGAATCTGAAAACCAGGTTCTTCGGCAGCAGTCTCTGCTAAACTCATCTGCAAAAACGATGTCAGAACATCTTTCTACCCACATATCTGAGAACTTGGAAAATGGTCACCATGTGGTTGAAGATCAGAAAACTGCTGAAGCACAGAGTGTCACACCTGTCAAGAAGTTTGGTACAGAATCTGATGGCAAATTGAGGAGATCCTTTATTGAACGTCAACATGAGAACGTTGATGCACTTGTCAACTGTGTTACGAAAAATATTGGTTTCCATCATGGAAAGCCTGTTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCGGCAATTGAGAATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATATGTCTGCACTATTGTTTTTGCTCCAGCAAAGTCTGAAATCTGGTAGTGCAACTGATACAACTCCTGTCAAAAAACCACCAAATCCGACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGTTCATCCCCTTCTTCGGCCAACCTTCCTACCCCACCATTGGAGGTTGTACGCAAGGTAGAAGCTAAATATCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATACGGTATCCTTCGGGACAACTTGAAGAAAGAATTGGCATCATTGCTTTCATTATGTATCCAGGCGCCAAGAACATCTAAGGGAGTGCTACGATCTGGGCGATCCTTTGGTAAAGATTCTCCCATGGGTCACTGGCAGAGTATTATAGAATCCCTGAACACTCTCCTCTGTACTCTGAAAGAGAACTTTGTACCTCCAGTCCTTATCCAAAAGATCTTCACTCAAACATTCTCATATATTAATGTTCAGCTTTTCAATAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATATGTGAAATCTGGTTTAGCAGAAATGGAGTTGTGGTGCTGCCAAGCAAAAGAGGAGTATGCAGGTTCATCATGGGATGAGCTTAAGCACATAAGACAAGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCAATCATGAGTGTCCAGCAGCTGTACAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGGGTGCTTATGGCTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGTATCCCCTTCTCAGTGGATGACCTCTCGACATCAATGCAAGAGAAGGATTTCTCAGACATGAAACCAGTGGATGAGCTGCTTGAGAATCCTGCCTTCCGATTTTTGAATGATGTAAAGGGTCAAGAA 4782 0.4128 YSVPIRFHHSQLQRSFDFLTGAVVQRARSGASARFSIRSIYRKWYQFLALLFFILVTVESIRSHKALGTNRGTGYKNLKKSRMRAAAAKPVVGSHVWVEDSQVAWIDGEVLEVKGEEIKVLCASGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLSNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRTNNAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIQKYKLGNPRTFHYLNQSNCYELEGVDEFKEYCDTRRAMDVVGISSEEQEAIFQVVAAILHLGNIEFTKGKEIDSSVPKDEKSWFHLRTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNKDILDLIEKIAVCYAFCSMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCSFVSGLFLPSPEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEVTACKRILVKVGLEGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRKVRTYLARRSFVSIRLSAIQIQAACRGQLARQVYEGLRQEASSLMIQRYFRMHVARKAYTELYSSAVSIQTGMRGMAARSELRFRKQTSAAIVIQSHCRKYLAQHHFTNLKKAAIITQCAWRGKVARRELRNLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDIEESKTKENEKLQSALQEMQLQFKETKLLLQKEREAAKREAERAPVIQEVPVVDHDLLEKLTSENEKLKTLVSSLEKKIDETEKRYEEANKISEERLKQALDAESKIIQLKTSMQRLEEKFSDMESENQVLRQQSLLNSSAKTMSEHLSTHISENLENGHHVVEDQKTAEAQSVTPVKKFGTESDGKLRRSFIERQHENVDALVNCVTKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNMSALLFLLQQSLKSGSATDTTPVKKPPNPTSLFGRMTMGFRSSPSSANLPTPPLEVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKSGLAEMELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSMQEKDFSDMKPVDELLENPAFRFLNDVKGQE 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12203g00001 1594 Gene3D - 743 810 - -
Mupr12203g00001 1594 Pfam Myosin N-terminal SH3-like domain 93 135 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 Coils Coil 993 1027 - -
Mupr12203g00001 1594 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Mupr12203g00001 1594 FunFam Myosin XI D 812 861 - -
Mupr12203g00001 1594 Gene3D Kinesin motor domain 148 739 IPR036961 -
Mupr12203g00001 1594 ProSiteProfiles IQ motif profile. 814 841 IPR000048 GO:0005515
Mupr12203g00001 1594 Pfam IQ calmodulin-binding motif 933 952 IPR000048 GO:0005515
Mupr12203g00001 1594 Pfam IQ calmodulin-binding motif 814 832 IPR000048 GO:0005515
Mupr12203g00001 1594 Pfam IQ calmodulin-binding motif 863 880 IPR000048 GO:0005515
Mupr12203g00001 1594 Pfam IQ calmodulin-binding motif 909 928 IPR000048 GO:0005515
Mupr12203g00001 1594 Pfam IQ calmodulin-binding motif 838 855 IPR000048 GO:0005515
Mupr12203g00001 1594 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 91 140 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 FunFam Myosin 2 397 506 - -
Mupr12203g00001 1594 FunFam unconventional myosin-Va 911 958 - -
Mupr12203g00001 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 864 960 IPR027417 -
Mupr12203g00001 1594 SMART DIL_2 1410 1517 IPR002710 -
Mupr12203g00001 1594 SMART MYSc_2a 140 810 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 ProSiteProfiles Dilute domain profile. 1234 1535 IPR002710 -
Mupr12203g00001 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 862 IPR027417 -
Mupr12203g00001 1594 Gene3D - 520 700 - -
Mupr12203g00001 1594 PANTHER MYOSIN 141 1523 - -
Mupr12203g00001 1594 Gene3D Myosin VI head, motor domain, U50 subdomain 397 678 - -
Mupr12203g00001 1594 PRINTS Myosin heavy chain signature 232 257 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 PRINTS Myosin heavy chain signature 563 591 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 PRINTS Myosin heavy chain signature 510 538 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 PRINTS Myosin heavy chain signature 281 308 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 PRINTS Myosin heavy chain signature 175 194 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 CDD MyosinXI_CBD 1185 1558 IPR037975 GO:0007015
Mupr12203g00001 1594 SMART iq_5 907 929 IPR000048 GO:0005515
Mupr12203g00001 1594 SMART iq_5 859 881 IPR000048 GO:0005515
Mupr12203g00001 1594 SMART iq_5 811 833 IPR000048 GO:0005515
Mupr12203g00001 1594 SMART iq_5 882 904 IPR000048 GO:0005515
Mupr12203g00001 1594 SMART iq_5 930 952 IPR000048 GO:0005515
Mupr12203g00001 1594 SMART iq_5 834 856 IPR000048 GO:0005515
Mupr12203g00001 1594 FunFam unconventional myosin-Va 862 910 - -
Mupr12203g00001 1594 Pfam DIL domain 1411 1514 IPR002710 -
Mupr12203g00001 1594 Coils Coil 1049 1125 - -
Mupr12203g00001 1594 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Mupr12203g00001 1594 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Mupr12203g00001 1594 ProSiteProfiles Myosin motor domain profile. 145 809 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 Coils Coil 954 988 - -
Mupr12203g00001 1594 Gene3D - 337 395 - -
Mupr12203g00001 1594 Gene3D - 910 959 - -
Mupr12203g00001 1594 Gene3D - 862 909 - -
Mupr12203g00001 1594 Gene3D - 811 861 - -
Mupr12203g00001 1594 ProSiteProfiles IQ motif profile. 931 960 IPR000048 GO:0005515
Mupr12203g00001 1594 ProSiteProfiles IQ motif profile. 908 934 IPR000048 GO:0005515
Mupr12203g00001 1594 Pfam Myosin head (motor domain) 147 797 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mupr12203g00001 1594 FunFam Myosin heavy chain 337 392 - -
Mupr12203g00001 1594 CDD MYSc_Myo11 159 797 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12203g00001 Mupr-Chr12203 3740 22063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12203g00001 90 1588 Myosins gene family AT5G43900 75.149 0.0 2320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12203g00001 K10357 - gmx:100791070 2802.31