Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12195g00001 ATGGGAAGGGCTCCTTGTTGTTCTAAAGTGGGGTTACACAAAGGTCCATGGACTCCTAAAGAAGATGCATTGCTTACCAAGTATATCCAAGCTCATGGAGAAGGCCAATGGAAATCACTACCAAAAAAAGCAGGACTTCTTAGATGTGGAAAAAGTTGTAGATTGAGATGGATGAACTACTTGAGACCAGATATAAAAAGAGGGAACATAACTCCAGAAGAAGATGATCTTATAATAAGAATGCATTCACTTTTGGGAAATAGGTGGTCTCTCATAGCAGGAAGGTTACCGGGGAGAACAGACAATGAAATAAAGAACTATTGGAATACCCATCTATGCAAAAAGCTGAAAAATCAAGGAAGTGATGACACAAACACAGACAATATGTTAGGGAGTCCTGAACAAGAACCTGCCAGTGAGAACAAGAAAAAGAAGAAGAACGGTGGGAAAAAAAAGAAGAAAGGGACAAATAATGCTGAGGCACCAAAGACACAAGTTTATCTACCAAAACCCATTAGAGTTAAAGCTTTGTTTTTACCAGGAACTGATAGTAACAGCTTCTTCACCTTTGATTCCAATTCAGCTAGTGGATCAACGAGCCAGGAAAAGGAGGAGAGTCCCGTGACGAAAGAATCAAACGTGGTTAGTGAAATTGGTAATGTGGGAGAAAGTGGTGGTTTTGGCTTCTTCACTCAAGACCATGACTTAGTCAACGCCTCGGATATTGAATGCCATTCTTATTTTCCCACTGATCATGGCACCTTACAGCAACTATATGAAGAGTATTTTCAACTATTGAACATGGACCATACCCAATTCGAAATGAATTCCTTTGCCGAATCTTTATTAATGTGA 855 0.3965 MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLCKKLKNQGSDDTNTDNMLGSPEQEPASENKKKKKNGGKKKKKGTNNAEAPKTQVYLPKPIRVKALFLPGTDSNSFFTFDSNSASGSTSQEKEESPVTKESNVVSEIGNVGESGGFGFFTQDHDLVNASDIECHSYFPTDHGTLQQLYEEYFQLLNMDHTQFEMNSFAESLLM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12195g00001 284 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr12195g00001 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr12195g00001 284 FunFam MYB transcription factor 68 128 - -
Mupr12195g00001 284 CDD SANT 16 61 IPR001005 -
Mupr12195g00001 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr12195g00001 284 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 210 - -
Mupr12195g00001 284 FunFam Myb transcription factor 11 67 - -
Mupr12195g00001 284 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr12195g00001 284 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr12195g00001 284 MobiDBLite consensus disorder prediction 117 166 - -
Mupr12195g00001 284 Gene3D - 71 165 - -
Mupr12195g00001 284 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mupr12195g00001 284 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr12195g00001 284 CDD SANT 71 112 IPR001005 -
Mupr12195g00001 284 SMART sant 66 114 IPR001005 -
Mupr12195g00001 284 SMART sant 13 63 IPR001005 -
Mupr12195g00001 284 Gene3D - 14 66 - -
Mupr12195g00001 284 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12195g00001 Mupr-Chr12195 7883 8966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12195g00001 1 208 MYB Transcription Factor Family AT4G38620 52.133 2.47e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr12195g00001 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12195g00001 K09422 - gmx:100101857 473.396