Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12192g00004 ATGGTGTCCCTCAACCCAAACCCACCTCAAACTTTTCACCTCTTCGACCCCTTCAACATGGAGGATCCCAATAAGAAGGTCCGAAAACCTTATACCATTACCAAGTCCAGAGAGAACTGGACCGACTTGGAGCATGACAAGTTTCTCGAAGCTCTTCACTTATTCGACCGAGACTGGAAGAAGATTGAAGCATTTGTAGGTTCAAAAACAGTTATCCAGATAAGGAGTCATGCACAGAAGTACTTCATGAAAGTCCAGAAGAATGGCACAAGTGAACATGTACCTCCCCCTCGTCCAAAGAGAAAAGCTACTCATCCATACCCACAAAAAGCTTCTAAAAATGCTATTACTATATCCCAAATTACAAGGCCATTGCAAGCTTCATCTGCTTTATCTGAATCATCATACATTTATAGGCCAGACTCTTTATCTGTGCTTAGAACTCCAGTTAGTAGTGTGCCATTGCCATCTTGGGGTTATAATGTTAAGCCACCAATCAGTCTTCCTCAAGTGACTAAAGATGATGTGGTGTTGAGTCAACAAGCCATTCCTTTCAATTACTGCTATAGCAGTAGTAATGAGAGCACTCCTAGGGGTTGGCCAAGTGGCAAACAGATAGATCAGGGTGACCAAGGCAAGCCAATTAAAGTAATGCCAGATTTTGCACTAGTCTATAACTTCATTGGCAATGTATTTGATCCAAATGCAAATAATCATCTACAGAAGCTGAAACAGATGGACCCAATAAATGTGGAAACTGTATTGCTATTGATGAGAAACCTCGCCACCAATTTAAGGAGTCCTGAATTTGAGAGTGAGAGAAGGCTGCTGTCAACATACAATGCAAACTCGGAGAAGGCAAAATCCAGTAATCATCTCAGCCAATCACTCACTGACAGATCAGACAGTGCT 912 0.42 MVSLNPNPPQTFHLFDPFNMEDPNKKVRKPYTITKSRENWTDLEHDKFLEALHLFDRDWKKIEAFVGSKTVIQIRSHAQKYFMKVQKNGTSEHVPPPRPKRKATHPYPQKASKNAITISQITRPLQASSALSESSYIYRPDSLSVLRTPVSSVPLPSWGYNVKPPISLPQVTKDDVVLSQQAIPFNYCYSSSNESTPRGWPSGKQIDQGDQGKPIKVMPDFALVYNFIGNVFDPNANNHLQKLKQMDPINVETVLLLMRNLATNLRSPEFESERRLLSTYNANSEKAKSSNHLSQSLTDRSDSA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12192g00004 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 84 IPR006447 GO:0003677
Mupr12192g00004 304 SMART sant 36 84 IPR001005 -
Mupr12192g00004 304 CDD SANT 39 82 IPR001005 -
Mupr12192g00004 304 Gene3D - 39 87 - -
Mupr12192g00004 304 PANTHER SWI/SNF COMPLEX-RELATED 20 274 - -
Mupr12192g00004 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 86 IPR017930 -
Mupr12192g00004 304 MobiDBLite consensus disorder prediction 88 115 - -
Mupr12192g00004 304 FunFam protein REVEILLE 6 isoform X1 39 87 - -
Mupr12192g00004 304 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Mupr12192g00004 304 MobiDBLite consensus disorder prediction 282 304 - -
Mupr12192g00004 304 ProSiteProfiles SANT domain profile. 35 88 IPR017884 -
Mupr12192g00004 304 Pfam Myb-like DNA-binding domain 37 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12192g00004 Mupr-Chr12192 34611 39285 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12192g00004 Myb_DNA-binding 5.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12192g00004 - - gmx:100791774 516.153