Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12191g00001 ATGTTTGACGAAAAAGTTACTCGACCCATTATTATAATAACTATTACTATTACTCTTACTCCTGCTCACAGGATCACATTATTAACATCCATGGAGGACTCATGGGAGAATTGGCATCTTCATATGGAAATGGATTGCGAGAACGATGACGAGTTCCTCAGAGACATCCTTCAGCAACCACTGCAATGTTTCTCTTCCGAAAGCGAAAGCGATCACTCCTTCCACGCTTCATCCGCAGACGACGCCGTTTTGTCACTGATCAAAACCAACTCCATAAACGCTTCAAAACGGCCTCGTCGTTTGTCCTCTCCCAGGACATACATTCTCTCCTTCGACAACTCTACCTTGATGCCCATCACACCCGAACCCTGCCCTCCTTCTTCCTCTTTACCTGCAAAACGGGCCTTGGAAACTCAAGGCCCAGAACCCACAACTACTCCTAATCACGGACCTAAGAAGACAAGAACCTCTTCTCAGACCATCGATCACATTATGGCAGAGAGAAGAAGGAGACAAGAACTGACAGAGAGGTTCATGGCACTCTCCGCCACGATTCCCGGCCTCAACAAGACGGACAAGGCTTCTGTACTGCGAGCAGCAATCGATTACGTGAAACAACTTAAAGAAAGGGTACAGGAACTAGAAAAACAAGAGAAAAAAAGGAGTGTAGAGTCAGTAGTATTCATGAAGAAACCCACCACCTCTTGTGAAACCAGCTGTAGCATCCTTCCCGAGATGGAAGCGAGAGTGTTGGGGAAGGAGGTGCTCGTTGAGGTCCACTGTGAGAAGGAAAATGGCATTGAGCTAAAAATATTGGACCACCTTGAAAATCTTCATCTCAGTGTCACCGGAAGCAGTGTCTTGCCATTTGGAAATTCTGCTCTCTGCATTACCATCACAGCTCAGATGGGTGATGCGTACAAAATGCCTGTGGATGATCTACTGAAAAACCTTAGACAAGTGCTCACAAAGTCACATGTGCTCTTCGACAGTGATCCGTACTAG 1005 0.4627 MFDEKVTRPIIIITITITLTPAHRITLLTSMEDSWENWHLHMEMDCENDDEFLRDILQQPLQCFSSESESDHSFHASSADDAVLSLIKTNSINASKRPRRLSSPRTYILSFDNSTLMPITPEPCPPSSSLPAKRALETQGPEPTTTPNHGPKKTRTSSQTIDHIMAERRRRQELTERFMALSATIPGLNKTDKASVLRAAIDYVKQLKERVQELEKQEKKRSVESVVFMKKPTTSCETSCSILPEMEARVLGKEVLVEVHCEKENGIELKILDHLENLHLSVTGSSVLPFGNSALCITITAQMGDAYKMPVDDLLKNLRQVLTKSHVLFDSDPY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12191g00001 334 Coils Coil 197 224 - -
Mupr12191g00001 334 Gene3D - 156 227 IPR036638 GO:0046983
Mupr12191g00001 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Mupr12191g00001 334 PANTHER BHLH TRANSCRIPTION FACTOR 34 325 - -
Mupr12191g00001 334 MobiDBLite consensus disorder prediction 139 158 - -
Mupr12191g00001 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 224 IPR036638 GO:0046983
Mupr12191g00001 334 Pfam Helix-loop-helix DNA-binding domain 163 208 IPR011598 GO:0046983
Mupr12191g00001 334 SMART finulus 164 213 IPR011598 GO:0046983
Mupr12191g00001 334 MobiDBLite consensus disorder prediction 118 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12191g00001 Mupr-Chr12191 1305 6184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12191g00001 154 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.355 4.09e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr12191g00001 HLH 8.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12191g00001 - - gmx:100778376 440.269