Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12185g00004 ATGTCATGGGATGAGCGTGAAGGAATCATCGACCTTCGGGGCACTTTCGGAAAACACGCATTGCAATTTTTCTATTTGCTTTTTGTTGCTCTACGTTTCTCAAAGGCAGATATGATGAGGCATGAGAATGGTTTGCATGATGAAGAGCATAAACATGACAAGAGAACAACACCAGAGAGCAACACAAACGGGGAAAACAGAAAACAAAAAGAAAAGGCTGAAACTGTTCCATATCACAGGCTGTTCTTATTTGCAGATTCCACTGACATCATTTTGATGGTTGTTGGAACCATTGGGGCCATTGGAAATGGTCTTGGGATGCCTCTCATGACATTGTTGTTCGGCCAACTCATTGACAGCTTCGGCAATAACCAACTTGGCACCCAAGTTGTCAAACAAGTTTCCAAGGTCTGTCTGAAATATGTGTACTTAGGAATAGGCATTGGTGTGGCTGCTTTCCTCCAGGTGACTTGCTGGACGATCACGGGGGAAAAACAAGCTGCAAGAATAAGGGGCTTGTATTTGAAAACTATACTAAGACAGGATATTACTTTCTTTGACAAGGAAACTAACACTGGAGAGGTGATAGGAAGGATGTCAGGTGACACTGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAGATTTCTGCAGCTAATAGCAACATTCTTTGGGGGCTTTGCGATAGCATTCATCAAAGGGTGGCTTCTAACTGTTGTCATGTTATCTGCTGTTCCACTTGTTGCTGCTGCTGGCGCTGCCATGGGCTTTATCATAGGAAGGATGGCAACACGAGGTCAAAGCGCGCATGCAAAAGCTTCACATGTAGTTGAAGAGACGATAGGTTCAATAAGAACTGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTGTCTAGTTACGAGAAATTTCTTGTGGATGCTTACAAATCAGGAGTTCATGAAGGTTTCGTAGGTGGCATGGGTATTGGCATAGTTATGTTAGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATGGTGGGGGTGAGGTGGTCAATGTGTTTGTTGCTGTGTTAAATGCTTCTATGTCTCTTGGCCAGGCATCTCCTTCCATGAGTGCTTTCGCTGCAGGTCAAGCAGCAGCTTATAAAATGTTTCAGACAATTGAGAGAATACCAGAGATAGATGCCTATGATCCAAATGGAAAAAAACTAGAGGATATTCATGGTGAAATTCATTTAAGGGATGTTTATTTCAGTTATCCATCAAGACCTGAGGAGATGATATTCAATGGATTCTCTCTTCATATACCTAGTGGCACCACTGCAGCTTTAGTAGGACAAAGTGGAAGTGGAAAGTCTACAGTTATCAGTTTGATAGAAAGATTTTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGCACTAATGTGAAAGAATTTCAGCTTAGATGGATCAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCAAGTATTAAGGATAATATTGCATATGGAAAAGAGGGAGCAACAGTTGAAGAGATAAGAGCTGCAGCTGAACTTGCAAATGCTGCTAAATTCATTGACAAACTGCCACAGGGATTGGACACAATGGTTGGGGAGCATGGAACTCAACTATCCGGTGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATACTGAAAGATCCAAGAATTCTACTTCTAGATGAAGCAACAAGTGCACTTGACGCAGAGTCAGAAAGAATAGTACAAGAAGCTCTAGACAGGATCATGGCCAACAGAACTACTGTGGTTGTCGCACATCGCCTGAGCACAGTGAGAAATGCTGATATGATCGCTGTAATTCACAGAGGGAAAATGGTTGAGAAAGGAACACACGTAGAATTAACCAAGGATCCTGAGGGAGCTTACTCTCAACTTATACGTTTACAAGAAGGAAAAAAGGAATCAGAAGAAGAAACAGACAATCAAAAGAAGAGGAAACTTTCATCTGAATCCTTTACAAGGATGAGTCAAAGACTGTCACTTAGAAGATCAGGATCATCTGTGGGGAGCAGTAGCCGCCACTCTTTTTCAGTTTCATTTGGTTTACCTATAGGAGTTAAAATCCCTGATCCTGAACTTGAAAACTCACACCCTAAAGAAAAACCACCAGAAGTTCCACTTGGGCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTGCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTGCCATATTTCCAATATTTGGTGTGTTGCTCTCTAGTGTTATCGAAACATTTTTTAAACCATTCCCTGAGATGAAAAAGGATTCAAAGTTTTGGGCAGTCATGTTTGTGATCCTTGGACTTGGATCTTTACTAGCAATTCCAGCCCGAAGTTACTTTTTCTCTATAGCTGGCAGTAAGTTAATCCGACGAATCAGGCTCATTTGTTTTGAGAAGGTGATCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAGCACTCTAGTGGTGCAATTGGTGCAAGGCTCTCAGCAGATGCTGCATCTGTGCGTGCCCTTGTTGGTGATGCTCTAGGACTATTGGTTCAAAATATAGCAACAGCACTGACAGGTTTGATCATTGCTTTCGTTGCCAGCTGGCAGTTGGCGTTTATACTTCTTATCTTAGTTCCCCTCATCGGAATGAATGGTTATATTCAAATGAAATTCATGAAGGGATCCAATGCAGATGCAAAGATGATGTATGAGGAAGCGAGCCAAGTTGCAAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTCTGTGCTGAGGAGAAAGTTATGGAACTATACAAGAAGAAATGTGAAGGTCCCATGAAAGCAGGGATAAGACAAGGCTTGGTAAGTGGGACAGGATTTGGTGTTTCGTTTCTCTTGCTCTTCAGTGTCTATGCAACCAATTTCTATGCTGGAGCCAGATTTGTGGAGGCTGGCAAGGCATCATTCTCAGATGTTTTTCGGGTTTTTTTCGCTTTAACTATGGCATCTATTGGAATTTCCCAATCAAGTTCCCTTACCCCTGACTCCAACAAAGCCAAGATAGCCACTGCTTCCATATTTAGAATAATTGATAGGAAATCAAAGATAGATCCAAGTGATGAGTCTGGTAACACACTGGATAGTGTAAAGGGAGAAATAGAGCTTCGTCATGTAAGCTTTAAGTATCCAACTAGGCCAGATATACAAATTTTCCGAGACCTTAGCTTGACCATCCATTCTGGCAAGACTGTGGCCCTTGTTGGTGAAAGTGGGAGTGGGAAATCCACAGTGATTGCCTTGTTACAGAGATTTTATGATCCTGATTCTGGTCAAATTACACTTGATGGCATAGAAATTCAGAATTTGCAGCTCAAGTGGTTAAGGCAGCGGATGGGACTGGTAAGCCAAGAGCCAGTCTTGTTCAATGACACCATCCGTGCCAATATTTCATATGGAAAGAAAGGCAATGCAACTGAAGCAGAAATCATAACCGCAGCAGAACAAGCCAATGCTCATGGGTTTATTAGTGGCTTACAACAAGGTTATGATACAGTAGTGGGAGAAAGGGGAACCCAACTATCTGGTGGGCAGAAGCAACGTGTGGCCATTGCACGTGCTATAATTAAAAGTCCAAAGATATTGCTACTAGATGAGGCCACAAGTGCACTAGATGCTGAGTCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTGATGGTGAGCAGGACCACCGTGATTGTGGCTCATCGTCTATCTACAATAAAAAATGCAGATGTGATTGCAGTGGTCAAAAATGGAGTTATAGTGGAGAAAGGAAGGCATGAGACACTCGTTAACATCAAGGATGGATTTTATGCTTCCTTGGTCCAACTTCATACAAGTGCCACAACAGCATGA 3942 0.4259 MSWDEREGIIDLRGTFGKHALQFFYLLFVALRFSKADMMRHENGLHDEEHKHDKRTTPESNTNGENRKQKEKAETVPYHRLFLFADSTDIILMVVGTIGAIGNGLGMPLMTLLFGQLIDSFGNNQLGTQVVKQVSKVCLKYVYLGIGIGVAAFLQVTCWTITGEKQAARIRGLYLKTILRQDITFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGRFLQLIATFFGGFAIAFIKGWLLTVVMLSAVPLVAAAGAAMGFIIGRMATRGQSAHAKASHVVEETIGSIRTVASFTGEKQAVSSYEKFLVDAYKSGVHEGFVGGMGIGIVMLVIFCGYALAVWFGAKMIMEKGYGGGEVVNVFVAVLNASMSLGQASPSMSAFAAGQAAAYKMFQTIERIPEIDAYDPNGKKLEDIHGEIHLRDVYFSYPSRPEEMIFNGFSLHIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNVKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATVEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMANRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHVELTKDPEGAYSQLIRLQEGKKESEEETDNQKKRKLSSESFTRMSQRLSLRRSGSSVGSSSRHSFSVSFGLPIGVKIPDPELENSHPKEKPPEVPLGRLASLNKPEIPVLLIGCVAAIANGAIFPIFGVLLSSVIETFFKPFPEMKKDSKFWAVMFVILGLGSLLAIPARSYFFSIAGSKLIRRIRLICFEKVINMEVGWFDEPEHSSGAIGARLSADAASVRALVGDALGLLVQNIATALTGLIIAFVASWQLAFILLILVPLIGMNGYIQMKFMKGSNADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYKKKCEGPMKAGIRQGLVSGTGFGVSFLLLFSVYATNFYAGARFVEAGKASFSDVFRVFFALTMASIGISQSSSLTPDSNKAKIATASIFRIIDRKSKIDPSDESGNTLDSVKGEIELRHVSFKYPTRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIQNLQLKWLRQRMGLVSQEPVLFNDTIRANISYGKKGNATEAEIITAAEQANAHGFISGLQQGYDTVVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVSRTTVIVAHRLSTIKNADVIAVVKNGVIVEKGRHETLVNIKDGFYASLVQLHTSATTA 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12185g00004 1313 MobiDBLite consensus disorder prediction 44 72 - -
Mupr12185g00004 1313 CDD ABC_6TM_Pgp_ABCB1_D1_like 93 377 - -
Mupr12185g00004 1313 CDD ABC_6TM_Pgp_ABCB1_D2_like 736 1051 - -
Mupr12185g00004 1313 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1068 1305 IPR003439 GO:0005524
Mupr12185g00004 1313 Pfam ABC transporter transmembrane region 94 367 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12185g00004 1313 Pfam ABC transporter transmembrane region 746 1017 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12185g00004 1313 ProSitePatterns ABC transporters family signature. 1208 1222 IPR017871 GO:0005524|GO:0016887
Mupr12185g00004 1313 SUPERFAMILY ABC transporter transmembrane region 79 400 IPR036640 GO:0005524|GO:0016020
Mupr12185g00004 1313 FunFam ABC transporter B family member 9 1035 1057 - -
Mupr12185g00004 1313 FunFam ABC transporter B family member 1 406 655 - -
Mupr12185g00004 1313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1059 1306 IPR027417 -
Mupr12185g00004 1313 Gene3D ABC transporter type 1, transmembrane domain 138 1042 IPR036640 GO:0005524|GO:0016020
Mupr12185g00004 1313 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 747 1033 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12185g00004 1313 Gene3D - 1058 1312 IPR027417 -
Mupr12185g00004 1313 Pfam ABC transporter 1087 1236 IPR003439 GO:0005524
Mupr12185g00004 1313 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 94 381 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr12185g00004 1313 SMART AAA_5 443 629 IPR003593 GO:0016887
Mupr12185g00004 1313 SMART AAA_5 1095 1288 IPR003593 GO:0016887
Mupr12185g00004 1313 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 416 652 IPR003439 GO:0005524
Mupr12185g00004 1313 FunFam ABC transporter B family member 1 726 1034 - -
Mupr12185g00004 1313 FunFam ABC transporter B family member 9 80 413 - -
Mupr12185g00004 1313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 654 IPR027417 -
Mupr12185g00004 1313 FunFam ABC transporter B family member 1 1058 1308 - -
Mupr12185g00004 1313 Coils Coil 650 670 - -
Mupr12185g00004 1313 SUPERFAMILY ABC transporter transmembrane region 734 1052 IPR036640 GO:0005524|GO:0016020
Mupr12185g00004 1313 Pfam ABC transporter 435 583 IPR003439 GO:0005524
Mupr12185g00004 1313 Gene3D - 414 671 IPR027417 -
Mupr12185g00004 1313 PANTHER ABC TRANSPORTER B FAMILY 55 655 IPR039421 -
Mupr12185g00004 1313 CDD ABC_MTABC3_MDL1_MDL2 1068 1306 - -
Mupr12185g00004 1313 MobiDBLite consensus disorder prediction 653 701 - -
Mupr12185g00004 1313 ProSitePatterns ABC transporters family signature. 555 569 IPR017871 GO:0005524|GO:0016887
Mupr12185g00004 1313 CDD ABC_MTABC3_MDL1_MDL2 416 654 - -
Mupr12185g00004 1313 MobiDBLite consensus disorder prediction 654 676 - -
Mupr12185g00004 1313 MobiDBLite consensus disorder prediction 677 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12185g00004 Mupr-Chr12185 24822 30604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12185g00004 68 1307 Calmodulin-binding Proteins AT2G36910 43.840 0.0 1034