LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr12185g00002	ATGCATGGCAGTCGTGTCTCTAGCTTGAAACGATGGGGATCCCACCAAGCGTCCCAGTCAGCAGACGTGGCATGGGGCCCACTGGAACTGCGGACTGCGTTTGGTGGCTCAGCAATCAGGCACGGCAATGATGCAATAATGAAACCTAAGGCACTCTCAAACACCGTAACATCCACACCAATCTCATCCCTTCACCTTTATGTTCTCTTTTCTCCTTTTGACGAGCCGTTTCTCACCACTTCCCACCCCATCGAACGCGCCGATTTCCCCTTGGCATCTTCCAAGTCCTTAAACGACGTCACTTCCCTGCGCGCAGCCGCAGACCCACGCGCGTGTGACGCGGAGATACAATCCTCCACCGAATCCTTTCACTTTCACCCCAAGAAGAAAAAACTGAGCCGTTGCAAGACAGCCCCTGCGATGGTTACCATGCGAGACCTCAAACCTAAGACTCCCCAAGTCCCCAAACCTCAATCTAGTTCCATCATCCGACAAGGCATTTGGCTACTGGCCATTTATCTCTCCGTGGGTGTCGCCATATATTCTTTCAACAGGGACCGTTTTTCCGGCATCGAGACACACCCCGTGGTGGATGCCCTTTACTTTTGTATTGTCACCATGTGTACCATAGGTTACGGTGACATAGCCCCGCTAACCCCATTCACCAAGGTCTTCGCTTGTGTTTTTGTTTTGGTGGGGTTTGGCTTTATAGACATACTCCTCAGCGGCCTTGTTAACTTCATTTTGGATTTGCAAGAGAACATGATTCTAACGGGCCTCCAAATGGGTCACAGGGAAGGTTTCTCCGCCAGGAATTACATCGTTGACGTGGCCAAGGGCAGGATGAGGATCAGGTTGAAGGTGGGCTTGGCTCTTGGGGTTGTGGTGCTCTGTATTGGGATTGGGAGTTTGGTCTTGTACTTTGTGGAAGGCTTGGGTTGGGTTGATTCTATTTACTTGTCGGTTATGTCTGTCACAACTGTTGGCTATGGGGACACGGCATTTAAGACTCTTCCTGGTCGCTTATTTGCGGCCATTTGGTTACTCTTTTCTACTTTGATGGTCGCTCGGGCTTTCCTCTATTTGGCAGAGGCCAGAATTGATCGAAGGCATCGGAGAACGGCTAAGAAAGTCTTGCAGAGGGATATTACCGTTCAGGATTTGCTCGCCGCTGACATCAACAACACTGGTTTCATAAGTAAGTCAGAGTATGTAATCTTCAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATGTGTTGCAAATTTGTGACCAGTTCAGGAAGCTTGACCCTTCTAACTGTGGCAAGATAACACTGCCTCATCTCTTGGAGGGCAGATCATAA	1347	0.4937	MHGSRVSSLKRWGSHQASQSADVAWGPLELRTAFGGSAIRHGNDAIMKPKALSNTVTSTPISSLHLYVLFSPFDEPFLTTSHPIERADFPLASSKSLNDVTSLRAAADPRACDAEIQSSTESFHFHPKKKKLSRCKTAPAMVTMRDLKPKTPQVPKPQSSSIIRQGIWLLAIYLSVGVAIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKVFACVFVLVGFGFIDILLSGLVNFILDLQENMILTGLQMGHREGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEGLGWVDSIYLSVMSVTTVGYGDTAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRTAKKVLQRDITVQDLLAADINNTGFISKSEYVIFKLKEMGKIQEKDVLQICDQFRKLDPSNCGKITLPHLLEGRS	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr12185g00002	448	SUPERFAMILY	EF-hand	389	443	IPR011992	-
	Mupr12185g00002	448	Pfam	Ion channel	296	364	IPR013099	-
	Mupr12185g00002	448	Pfam	Ion channel	170	248	IPR013099	-
	Mupr12185g00002	448	PANTHER	POTASSIUM CHANNEL, SUBFAMILY K	197	421	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Mupr12185g00002	448	ProSitePatterns	EF-hand calcium-binding domain.	392	404	IPR018247	-
	Mupr12185g00002	448	SUPERFAMILY	Voltage-gated potassium channels	279	386	-	-
	Mupr12185g00002	448	SUPERFAMILY	Voltage-gated potassium channels	159	248	-	-
	Mupr12185g00002	448	FunFam	Two-pore potassium channel 3	271	385	-	-
	Mupr12185g00002	448	Gene3D	-	271	391	-	-
	Mupr12185g00002	448	Gene3D	-	142	261	-	-
	Mupr12185g00002	448	PRINTS	Two pore domain K+ channel signature	326	335	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Mupr12185g00002	448	PRINTS	Two pore domain K+ channel signature	205	233	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Mupr12185g00002	448	FunFam	Two-pore potassium channel 5	151	261	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr12185g00002	Mupr-Chr12185	3732	5697	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr12185g00002	113	444	Ion Channels	AT4G01840	68.421	9.10e-163	463

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr12185g00002	K05389		-	gmx:100780438	613.609