Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12166g00001 ATGTTGGCCTCCACTCTCCTAACGCCCTCGAAGCTCAACCCTTCGCGTTTCGTTCTACTCACCACCGTCGCAGAAACTCACCCGAGAAACAGAATCACAATCTTTTCCAAATCGAACTCCAAACTCACTTTTGCTATCAGTGCCAGTAGTGACGGCCGTGACGGCGCCGTTGACGCTACCTCTCCCTCGGGTATTGAGGCAGTAACAAGTACATCTCCTGACCTGGGTGATGGTTATGTGGCCTTGTTTGTTCGTATGTTAGGCCTAGATCGTGATCCTCTGGATAGAGAACAAGCTATAATTGCCCTCTGGAAATATTCGCTTGGTGGAAAAAAGTGTATAGACACTTTAATGCAGTTTCCTGGGTGTATTAATCTTGTTGTGAACCTCCTCAGATCAGAGTCCAGTTCAGCATGTGAGGCAGCTGCCGGCCTTCTGCGATCACTATCTTCAGTCAATCTATATAGAAATTCTGTAGCTGATAGTGGAGCAATAGAGGAGATAAACAGATTGCTGAGGCAATCTTCCTTGGCTCCTGAGGTAAAGGAGCAGAGTTTGAGTACAATATGGAATTTATCTGTTGATGAGAAGCTCTGCATTAAAATTTCAACTACTGATATTCTCCCACTAGCTATTAAGTACCTTGACGATGAGGATATAAAAGTGAAGGAGGCTGCAGGGGGCATTTTGGCGAATTTAGCATTAAGCCGTGTTAACCACAACATCATGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACGTCCAATTTGGAAGGATCTAAAGTTATTAGGAAGGAAGCAAGGAATGCATTGCTGGAACTTGTTAAGGACAAATACTATAAAATTCTTGTTATTGAGGAAGGTCTGGTCCCTGTGCCATTAATTGGTGGTGCAGCCTTTAAGTCATTAACCTGGGGCTTACATTCGTGGCCTACATTCCCTGATGGTACAGAAATTGAAAGGACTTCAAGACAGCCATCCAGATATGGTGCTTCGGAATTACTTCTTGGATTAAATATTGATGACAAGAATGCTAACTTGGAGGAAGCAAAAGTCAATGCAATTGTAGGACGAACACAACAGCAATTCCTTGCTCGTGTTGGGGCTTTGGAACTGGAAGAAAAGACTCTACCTCATTCTGAATGTTCAAATGATCAGAGGTATACTCTTTTACCTTGGATGGATGGTGTTGCTCGTTTAGTACTGATACTACAACTGCCAGATAAGTCTGCGATAATAAAGGCTGCAGAGTCAATTGCTACTGCATGTATCAATGAACACATGCGCATTGCATTCAGGGAGGCTGGAACAATTAAGCAGTTAGTAAGGCTTCTGAATTATGATGATAATGCAGTCCAGTTGGCGGCAACACAAGCCTTAGAAAGGCTGTCTGTTAGCAACATCGTTTGCCAGGTAATGGAAGCCGAGGGGGTTTTAGGTCCTTTAGTTAGTATTTTGAAATGCTCGGAGATAGATGGAACTATTGTGGAAAAGTCTTTGAACATACTTTCTCGGATATTAGACCCCAGTAAAGAGATGCAATTGAAGTTTTATGATGGACCAGTTGATGGATCTAAAAAGGCATTTGGTGGAGCAAAAAGTGCTGGTGTTTCAACTGGGTTTAGTAGCACTGAACAAGCCGTAACATACACAAGGAATGATATACTGGATTCTGTTTTCATCGCACACCTTGTTGAGATTCTGAAGTCCTCTCCTCCCAGTTTACAAGAAAAAGCTGCATCTGTGCTTGAGTTTGTGGCATCGACTGACCCAACTCTGGCCCCAATTATATCTTTGGATATTGAATCTGGTAAACAATTTCTGCTCTGTAACATGTGCTCTGATATAGTTTATTGGTATGGGTTTAGAAGTCTT 1884 0.4257 MLASTLLTPSKLNPSRFVLLTTVAETHPRNRITIFSKSNSKLTFAISASSDGRDGAVDATSPSGIEAVTSTSPDLGDGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTLMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRQSSLAPEVKEQSLSTIWNLSVDEKLCIKISTTDILPLAIKYLDDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSNLEGSKVIRKEARNALLELVKDKYYKILVIEEGLVPVPLIGGAAFKSLTWGLHSWPTFPDGTEIERTSRQPSRYGASELLLGLNIDDKNANLEEAKVNAIVGRTQQQFLARVGALELEEKTLPHSECSNDQRYTLLPWMDGVARLVLILQLPDKSAIIKAAESIATACINEHMRIAFREAGTIKQLVRLLNYDDNAVQLAATQALERLSVSNIVCQVMEAEGVLGPLVSILKCSEIDGTIVEKSLNILSRILDPSKEMQLKFYDGPVDGSKKAFGGAKSAGVSTGFSSTEQAVTYTRNDILDSVFIAHLVEILKSSPPSLQEKAASVLEFVASTDPTLAPIISLDIESGKQFLLCNMCSDIVYWYGFRSL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12166g00001 628 Gene3D - 76 299 IPR011989 -
Mupr12166g00001 628 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 22 611 - -
Mupr12166g00001 628 SMART arm_5 236 279 IPR000225 GO:0005515
Mupr12166g00001 628 SMART arm_5 550 591 IPR000225 GO:0005515
Mupr12166g00001 628 SMART arm_5 152 194 IPR000225 GO:0005515
Mupr12166g00001 628 SMART arm_5 428 468 IPR000225 GO:0005515
Mupr12166g00001 628 SMART arm_5 195 235 IPR000225 GO:0005515
Mupr12166g00001 628 SMART arm_5 469 511 IPR000225 GO:0005515
Mupr12166g00001 628 SMART arm_5 110 151 IPR000225 GO:0005515
Mupr12166g00001 628 Gene3D - 385 601 IPR011989 -
Mupr12166g00001 628 SUPERFAMILY ARM repeat 398 596 IPR016024 -
Mupr12166g00001 628 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 164 IPR000225 GO:0005515
Mupr12166g00001 628 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
Mupr12166g00001 628 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 439 470 IPR000225 GO:0005515
Mupr12166g00001 628 SUPERFAMILY ARM repeat 83 297 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12166g00001 78 298 U-box Gene Family AT2G23140 29.018 4.45e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12166g00001 - - gmx:100810447 1001.5