Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12159g00001 ATGGAGTGGACTAGAGGCTTCATCATAGGACGTGGGTCATCAGCCACCGTCTACACCGCCACCTCCTCCCACTCCTCCACCGTGGCCGCCGTCAAGTCGGCGGAGCTATCACTATTAAACTCAGAACAGCTGAAGAGAGAAGAGAGAATCATGTCTTGTCTGTTTTCTCCCTACATAGTTAGGTACAAAGGATGTAACATTACAAAGGAAAACAACACCGAATGGTTCAACCTCTTCATGGAGTACATGCCATTTGGCACTCTCTCTCAGGAAAGTTGCCGGCACGGTGGCCGGCTGGCTGAGCCGACAATCGTGCACTACCTGCGACAAGTCCTGAAGGGTCTAGAGTATTTGCACTCAAGGGGTGTTGTGCATTGTGATATTAAAGGTAGCAACATATTGATCGGAGAAGATGGGGCCAAAATTGGAGACTTCGGATGTGCCAAGTTTGCCAATGAGTCTTCAGCGGCGGTGGGCGGCACGCCAATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGGAGCAGGGGTACCCTGCTGATGTGTGGGCTCTTGGGTGCACTATGGTTGAAATGGCCACTGGGTTTGCACCGTGGCCTAATGTGGAAGACCCTGTCACAGTGTTGTACCGTGTTGCATATTCCGACGAGTTGCCTGAGATTCCTTGTTTTCTGTCTGAGGAAGCAAAGGATTTCTTGGGAAAGTGTTTTAAGAGGAATCCCAAGGAAAGATGGAGTTGTAGTCAACTTTTGAAGCATCCTTTTCTTGGGAAATTCAGTTCCAATTATAAGGAAATTCAGGAATCTAATTCAAGTTCTCCAACAAGTATTCTTGAGCAGGGCTTTTGGAATTCTGTTGAAGAGGCAGAGTGTGTCTCTGGCAATGTGGCTCAGATTAAAAGTTTCGAGGATTCTCCTAAAGGTAGGATCAGAAGGCTAGCTTTGTATTCGGGGGATCCCATTTGGGAATTGCATGATGAGAATTGGATCACAACTAGGAGCAATGAAGTAGGGGTTCCTTCAACTACTCATGGGTTGGACTTGGATAGAATAGAAGAATGCAAGACAGGGCAGGCCCCAGGTTGTGGTGGTTACCTGTGTTTTAACTCTCAACCTCTCTCTGATCTTTATTTGTGTTGGTTGAATGAGTGTAATGGAAACGAAGCATGGGGAACCAAAGTTAGTGACTGTCCTCTCTCTCTTGGTGTTGGTGGCTATGCCATCTATTTTGCCAACTATTTATCTGTCAATGGTATTTGGTAG 1260 0.4754 MEWTRGFIIGRGSSATVYTATSSHSSTVAAVKSAELSLLNSEQLKREERIMSCLFSPYIVRYKGCNITKENNTEWFNLFMEYMPFGTLSQESCRHGGRLAEPTIVHYLRQVLKGLEYLHSRGVVHCDIKGSNILIGEDGAKIGDFGCAKFANESSAAVGGTPMFMAPEVARGEEQGYPADVWALGCTMVEMATGFAPWPNVEDPVTVLYRVAYSDELPEIPCFLSEEAKDFLGKCFKRNPKERWSCSQLLKHPFLGKFSSNYKEIQESNSSSPTSILEQGFWNSVEEAECVSGNVAQIKSFEDSPKGRIRRLALYSGDPIWELHDENWITTRSNEVGVPSTTHGLDLDRIEECKTGQAPGCGGYLCFNSQPLSDLYLCWLNECNGNEAWGTKVSDCPLSLGVGGYAIYFANYLSVNGIW 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12159g00001 419 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Mupr12159g00001 419 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 287 - -
Mupr12159g00001 419 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Mupr12159g00001 419 FunFam Mitogen-activated protein kinase kinase kinase 17 2 308 - -
Mupr12159g00001 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Mupr12159g00001 419 Pfam Protein kinase domain 8 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12159g00001 419 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12159g00001 419 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12159g00001 419 CDD STKc_MAPKKK 2 255 - -
Mupr12159g00001 419 SUPERFAMILY Protein kinase-like (PK-like) 4 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12159g00001 Mupr-Chr12159 1954 3560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12159g00001 1 334 MAP Kinase Kinase Kinase AT1G05100 50.291 2.25e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mupr12159g00001 Pkinase 4e-56 CL0016