Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12152g00003 ATGAGGTTCCTTCTCCGAAAGCAGCTCTTGAATTTGTCAGTGTCACCCTCTCCAGCTCGCACGCTTGTGGTTGGGCTTCAAGCGTGTGAGTTGTCATCTTCTTCTCGTCCTGATGACTCCCGAAACGTGAGAGTTTCGGTGTGGTGGGATTTCAAGAACTGCAACGTGCCAGCTGGCGTAGAAGCTTCTAAGGTTGTTCCTGCAATCACGCAGGCTGTGAGGGCCAATGGGATTAAAGGTCCGCTTCACATTACCGCTTTCGGCGATGTTCAGCAGCTCTCCAAGCCCAACCAGGACGCACTTGCTTGCACCGGCGTTCAATTCATCCACCTTCCTATCGAATTTGTTTTTAGTTTTCAAAATAAGGTTGCTCTGACAATTGGTGGAAGTGTGGAGTTGAAGGAGAGGTTCAACAAGATGAAAACGGAAGAAAACTTCTTCCCGCTGTTTCTGTTTTTTGGTAGAAAGAATAGTGTCAACATTCTTGTTGATATCATGTTTTGGGTATCCCAAAATCCTCCACCTGCACATCTCTTTCTGATATCTGGTGATAGAGATTTTGCTTGCATATTATCCCGGTTAAGAATGAATAATTACAACATCTTGCTTGCTAGCCCAGAGAATGCTCCTGGTGTTCTCTTCAGTGCAGCAACTATAATGTGGCAATGGTCTTCATTGCTTAAGGGAGAAAATCTTATTGGAAAACATTTCAACCATCCTCCTGATGGTCCATTTGGTTCTTGGTATGGAAACTTTAAGGTGCCACTTGAAAACCCAGTCCCAGCTACTGAGCAGTCTACATCTTTACAAAATGTGGACATCTATGAACCTTCCTTAGACTTAAAGTTAGGTGCAGTTCCAAAATCAGTTGTACGGAAGGTTAAGCATATATTGAGTTCACATCCAAAAGGGATCTCCATTACAGATCTTCGTGCAGAGTTGGCAAAATGTGACGTGCATTTGGATAAAATTTTATATGGATTTAGAAGCCTTTCACGCTTTCTATTGTCAATCCCACATGTGCAGCTCCAGCCTTTAGGGAATGGTAATTTTGGTGTATGTTTGGTCCCCACAGAGTCCCTTGAACCTTCGGACAGCAGTGTTGTCCCATCAACATCATCTTCTGTTAAGAATGAAGAGGGGCGATATGCAGATGAGATTCCCTCAATTGCCACAGTCCATGCGAGGAGTCTGAAGGATGATTCAAAATCATTCCAACCACTCCCTCCCCAAGGCAAAACCATTGGGAAATATGTGGATGGTAAATCATCATTTCCTTTATTTGTTGAAAGACATGAATTTCAGCCCCAAAATGAGTTGCAAAAATCTTCTCTGGCTAGTGAGAAGGTTGTGGATGTGGCTAATGCACAACTAGCTGAGATTCAACAGCCATTCAAGGACAGCAAATTTTCTAAAACTAAGACAGGTTCCTTAAAAACTAGATCTAAAAAGTCATCTGATAATGACAGTGTTAAGTCTGAGGAAGCAAGTCATAAAATTATAGAAAAACATACCACTTCCGGGATTTACTGTGCTGGAAATGAACAGACAACAATGGGAAACAATGGTATTGCAAATTATGAATTGGGAAATTTTAAAGGCAAGAACAAATACGAGAGTCCAACTAGAAAGGAGACTGATGAAGTTTGTTTCCACCCATATTCTTCAGTTGATGACTCTCTGGTTGGCAAAAGGCCAACATTCTTTAGCTGGATTAGAAGTTGGTGGCCATTTTCAAAAAGCAATGCAAAGTCTGATGATTTGGCTGCTCATCAGAACAAAGTGGTTAGTCACTTGGAGGATTCTAAGTTATCGGAACTAGACCAGACTGTTAGTGATTTTGAAGAATCCAAGTTATCAGAACTGGACCAGAATGTTATTTATTCTGGAAAGCCTGAGTTGTTTTCTAGTGGTTCCTTTTGGAATGACCTGGAATCTTTTATTTTCACGCCCAAAGGATCACTTCTTGTTTCCCAGTCAAAACAAAGGGAGGATATGGCACATAAATTACAAAAAGATGGACCCCTGGTTCTTAGATCTCTCACTCAAAAGGATATCCTTCAATTGGTGGAATCGTTAATAGCAGAGAAAAAGTGGTTGGTGGAGATCCCTTCCCAAATATTTCCTTTTAGGTTAACTCAACCTGTTCAGAAGAACTCGTTGATGCACCAATCCCATGGTGCAAATAGCTTGAGATCTGTCTTTCTGAGCAGAGCATCACAGTCCAAGTTGCAAATTCATTTGAGCATGTTGTGGAGAAACAAAGTCAGAAAACCTGTGAGTGAGATATTGAGGGACCACCCAGAGGGATATAATGTAATGCCTGGAGTTAAATTAGAGTCCTCATATATTTTTCCATCTGTTCCTGTTGTTAATGCTTCTGATGGGGAAACTTCTATCCTCAAAACTCAAATAACCAATGCTAGTCATGCAGTATTCAACTCAGATACTGAACTATCTGATTCGGCACCAAAAGATAATAACAAAGAATTTCCATGTGAGGAATTAGGTCTTGTTTCTGTCAAGAATTCTAACAAGAGTGATTTGGAATCGAAATTAAGTCAGGAAATGGAGATATATGAACCTTCCTTAGATTTAAAGTTAGGTACAGTTCCAAAATCAGTTATAAGACAGATTAGGCGGATATTGATATCACATCCAAAAGGAATCTCAATTACAGATCTTCATTCAGAGTTGACAAAATGTATTATTGATGAGAGCAATGCAAAGTCTGATGATTTGGCTGCTCATCAGAACAAGGTGGTTAGTCATTTGGAGGATTCTATATTATCTGAACTGGACCAGACTGTTAGTGATTTTGAAGAACCCAAGTTATCAGAACTGGACTATAACATGGAATATTTTATTTTCACGTCCAAAGGATCACTTATCGTTTCCCAGTCAAAAAACAGGGAGGATATGGCGCATAAATTCCAAAAGGATGGACCCCTGGTTCTTAGATCTCTCACTCAAAAAGATATCCTTCAATTGGTGGAATTGTTAATATCAGAGAAAAAGTGGTTGGAGGAAAGCCTCTCCCAAACATTTCCTTTTAGGCTAACTCAACAAGTTCAGAGGAATTCATTGATGGGCCAATCTCATGGTGCAAATGGCTTGAGCTCTCTCTTTCTAAGCGGAGCATCACAGACCCACTTGCAAAAGTCATTTGAACATGATGTGGAGAAACACAATCAGAGTATTCCTCATACTAGAGTTTCTGCAACTGCCACTGATATGAAATATACTGAGAGATCTAGAAATGATATTTTAGAAGATTGTCAGAAACTTGTAAATGGGATATTGAGGGAGCACCCAGAAGGATATAGTATTAGTTCTTTTCCAAGACTGTTTATTGATAGGTTTGGCTATCATCTTGACTTACAGAAGCTTGGTTACAAAAAGTTGGCATCCTTACTACAGATAATGCCGGACGTTAAGGTAGAGTCCACTTATATTTTTCCTTCTGTTCCTGCTGTTAGTGTTTCTGATGGAGAAACTTTTCTCCTCAAAACTCAAGTAGCCAATGCTAGTCATGCTCATGCAGTCTTGAACTCAGATAGTGAATTATCCGATTCGTCCCCCAAAGATGATAACATGGAATCTCCATGGGAGGAATTAGATCATGTTTCTGTCAACAATTTCAACCAGAGTGATGTGGAGTCAAAATTAAGTCAGAAAGCTAAAGAACTGGATATATCAAAGCTTCCTGATTATGAACCCATAGTCTCAGATTATGATTCTTCTGAATCTGAAGGAGATTGCTCTTATTTAACTCGATCTGAAAAACAAGGAAAGTTAAAATGTAATGAGCAAGACAGTTCATTTTGGCAAGCTCTGGATTTGTGGCACAGCAGCAAGGAAGGAGAGAGTAGTGTCAAGAAGTCAGACAATGTTGGTCACTTGAATAATACTTTGGCTGATATTTTAAATTCATCCACCGAGTCTAAAATTCCTGTACGGAATTACAGGCAAAGACCTCAAAATAACTATTCGTTTGTTGCTGATCCAGGATCCTTACCTGACAAAAACAGGCTGGTTGATGGGATATTAAATGGCCTCAAGAAAGCAGATGATTTATTTTGTGAAGTGTACTTCTCACTATAG 4104 0.3989 MRFLLRKQLLNLSVSPSPARTLVVGLQACELSSSSRPDDSRNVRVSVWWDFKNCNVPAGVEASKVVPAITQAVRANGIKGPLHITAFGDVQQLSKPNQDALACTGVQFIHLPIEFVFSFQNKVALTIGGSVELKERFNKMKTEENFFPLFLFFGRKNSVNILVDIMFWVSQNPPPAHLFLISGDRDFACILSRLRMNNYNILLASPENAPGVLFSAATIMWQWSSLLKGENLIGKHFNHPPDGPFGSWYGNFKVPLENPVPATEQSTSLQNVDIYEPSLDLKLGAVPKSVVRKVKHILSSHPKGISITDLRAELAKCDVHLDKILYGFRSLSRFLLSIPHVQLQPLGNGNFGVCLVPTESLEPSDSSVVPSTSSSVKNEEGRYADEIPSIATVHARSLKDDSKSFQPLPPQGKTIGKYVDGKSSFPLFVERHEFQPQNELQKSSLASEKVVDVANAQLAEIQQPFKDSKFSKTKTGSLKTRSKKSSDNDSVKSEEASHKIIEKHTTSGIYCAGNEQTTMGNNGIANYELGNFKGKNKYESPTRKETDEVCFHPYSSVDDSLVGKRPTFFSWIRSWWPFSKSNAKSDDLAAHQNKVVSHLEDSKLSELDQTVSDFEESKLSELDQNVIYSGKPELFSSGSFWNDLESFIFTPKGSLLVSQSKQREDMAHKLQKDGPLVLRSLTQKDILQLVESLIAEKKWLVEIPSQIFPFRLTQPVQKNSLMHQSHGANSLRSVFLSRASQSKLQIHLSMLWRNKVRKPVSEILRDHPEGYNVMPGVKLESSYIFPSVPVVNASDGETSILKTQITNASHAVFNSDTELSDSAPKDNNKEFPCEELGLVSVKNSNKSDLESKLSQEMEIYEPSLDLKLGTVPKSVIRQIRRILISHPKGISITDLHSELTKCIIDESNAKSDDLAAHQNKVVSHLEDSILSELDQTVSDFEEPKLSELDYNMEYFIFTSKGSLIVSQSKNREDMAHKFQKDGPLVLRSLTQKDILQLVELLISEKKWLEESLSQTFPFRLTQQVQRNSLMGQSHGANGLSSLFLSGASQTHLQKSFEHDVEKHNQSIPHTRVSATATDMKYTERSRNDILEDCQKLVNGILREHPEGYSISSFPRLFIDRFGYHLDLQKLGYKKLASLLQIMPDVKVESTYIFPSVPAVSVSDGETFLLKTQVANASHAHAVLNSDSELSDSSPKDDNMESPWEELDHVSVNNFNQSDVESKLSQKAKELDISKLPDYEPIVSDYDSSESEGDCSYLTRSEKQGKLKCNEQDSSFWQALDLWHSSKEGESSVKKSDNVGHLNNTLADILNSSTESKIPVRNYRQRPQNNYSFVADPGSLPDKNRLVDGILNGLKKADDLFCEVYFSL 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12152g00003 1367 Gene3D - 1084 1152 IPR041966 -
Mupr12152g00003 1367 ProSiteProfiles OST-type HTH domain profile. 286 357 IPR025605 -
Mupr12152g00003 1367 PANTHER LIMKAIN B LKAP 32 746 IPR024768 GO:0005777|GO:0010468
Mupr12152g00003 1367 Pfam NYN domain 44 217 IPR021139 GO:0004540
Mupr12152g00003 1367 CDD PIN_limkain_b1_N_like 44 206 - -
Mupr12152g00003 1367 Gene3D - 287 354 IPR041966 -
Mupr12152g00003 1367 MobiDBLite consensus disorder prediction 470 497 - -
Mupr12152g00003 1367 CDD LOTUS 287 341 - -
Mupr12152g00003 1367 MobiDBLite consensus disorder prediction 480 497 - -
Mupr12152g00003 1367 ProSiteProfiles OST-type HTH domain profile. 1089 1163 IPR025605 -
Mupr12152g00003 1367 CDD LOTUS 1090 1147 - -
Mupr12152g00003 1367 Pfam OST-HTH/LOTUS domain 288 350 IPR025605 -
Mupr12152g00003 1367 Pfam OST-HTH/LOTUS domain 1090 1149 IPR025605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12152g00003 Mupr-Chr12152 9836 16146 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12152g00003 34 229 C2H2 Transcription Factor Family AT5G61190 33.673 5.04e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12152g00003 - - gmx:102660946 1692.94