Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12152g00002 ATGAGGCCCCGTCTCCGAAAGAATCAATTATTGGCGCTTCAAGCGCGTGACTGGTCATCTTATTGCGGTGGTTACCAACGTCAGTGGCAGGGTCCGGGGGAGGAGTCCCGAAACGTGAAGGTTTCTGTCTGGTGGGATTTTGAGAACTGCCCGGTCCCGGCCGGGATTGATGCTTCTGAATTGGCCCCCGCAATCACGGAGGCTGTGAGAGCCAGTGGGATTAAAGGCCCTCTTCGAATCAATGCTTTCGGTGATGTTCTTCGCTTCTCCAAACCCAACCAACACTCACTTCCTCACACCGGCATTCACTTCACCCATATTCCTGGCGGAAAGAACAACGCTGATAGATTTCTTCTTGTTGATCTCATGGATTGGGTTTCTCAAAACCCTCCACCTGCTCATCTCTTTTTGATATCTGGTGATAGAGACTTTGCTGGAACATTACACCGCTTAAGAATGAATAATTACAATATATTACTTGCTAGCCCCGATAATGCTCCTCATGTTCTCTGCAGTGCAGCAACTATAAGTTGGCATTGGTCTTCATTAGTAAAGGGGGAATATCTTTCTCGAAAACATTTTAACCCTCCTCCTCTTACTTTGCTTGCTTCTTCATATGGCAATTGTAAGGTGACTCTTCAAAATCCCTTCTCAGCTGTTCAGCACTCTACTTCTTCACCAAAAGCTGATATATGTCAACCTTCCTCTGATTTAATGTTAGATGCTTTTTCAAAATCAGTTGTAAGACAGATTTGGTGTATATTGAGATCACATCCGAAAGGAATTTTAATTGGAGATCTTCGTGCAGAGTTGACCAAACATAATGTGTCTTTCGGTAAAAGCTTTTATGGATATAAATCGTTTTCTCGCTTTATATCATCAGTGCCACAAGTAGAGCTCGAGCCTTTAGGTAATGGTAATTTTCGTGTATGTCTGGTACCCTCGGAATCCCCTAAACCTTTTGAGGGCAGTGCTTTAGAATCAATGAAATATGCTGTTAAGGTTTATGAGAGGGGATCTGCAGCAACTCCGAAGGTAAATGGTGAGGATAAAGATAAGGCTAGAGAAGCAAATGGGACACCCTTAACTGCCTCATCTCACGAAAGGAGTATGCATGATGATTCTAAATCATTCCAACCGGTTACTTCACAAGTCAAACCCGTGGTAGAATATGTAGATGCTAAATCATCACTTTCATTGGTTGAAAGACGTGTGCCTCAGCCCCCAAATGAGTTGCAGAAATCTTCTCTGTGTAGTGTGAAGGTTGTAGATATGTCTACTGCACAACTGTCAAAGATTCAACCACCACTTAAGTCTAAAAGCTCATCTGATGATGACATTTTTGAGTCTGAGGATGCAAGTCATAAAATTCAGGAAAAATACACGACTTCAAGGAATCACTCTGCTGGAAATGATCAGACAGCGGTGGAAGACATTGGTACTGCAAATTATGAATCTGGAAATTTTAGGGCAACGAACAAATTTGAGAATCCAACTAGAAAGGAGGTTGATGAAGTTTGTCACAGACCATATTCTTCACCAGTTGATGACTCTCTGGTTGATAAAAAACCTGGTGGAAGTGATGAAACTTATAGGAAAGGTCCAACATTCTTTGTCTGGGCGAAAAACTGGTGGCAATTTTGGAAAGGCAATCCAAAATCTGGTGATTCAATTGCTCATCAGAACAAGGTGGTTAGTCATTTTGAGGATTCTAACTCATCTGAACTAAACCAGACAGTCCAGACTGTTAGTGATTTTGAAGAACCCAAGTTATTAGAACTGGAAAACAATGCAACAAATTAA 1803 0.4199 MRPRLRKNQLLALQARDWSSYCGGYQRQWQGPGEESRNVKVSVWWDFENCPVPAGIDASELAPAITEAVRASGIKGPLRINAFGDVLRFSKPNQHSLPHTGIHFTHIPGGKNNADRFLLVDLMDWVSQNPPPAHLFLISGDRDFAGTLHRLRMNNYNILLASPDNAPHVLCSAATISWHWSSLVKGEYLSRKHFNPPPLTLLASSYGNCKVTLQNPFSAVQHSTSSPKADICQPSSDLMLDAFSKSVVRQIWCILRSHPKGILIGDLRAELTKHNVSFGKSFYGYKSFSRFISSVPQVELEPLGNGNFRVCLVPSESPKPFEGSALESMKYAVKVYERGSAATPKVNGEDKDKAREANGTPLTASSHERSMHDDSKSFQPVTSQVKPVVEYVDAKSSLSLVERRVPQPPNELQKSSLCSVKVVDMSTAQLSKIQPPLKSKSSSDDDIFESEDASHKIQEKYTTSRNHSAGNDQTAVEDIGTANYESGNFRATNKFENPTRKEVDEVCHRPYSSPVDDSLVDKKPGGSDETYRKGPTFFVWAKNWWQFWKGNPKSGDSIAHQNKVVSHFEDSNSSELNQTVQTVSDFEEPKLLELENNATN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12152g00002 600 PANTHER LIMKAIN B LKAP 30 458 IPR024768 GO:0005777|GO:0010468
Mupr12152g00002 600 MobiDBLite consensus disorder prediction 343 381 - -
Mupr12152g00002 600 MobiDBLite consensus disorder prediction 442 462 - -
Mupr12152g00002 600 Pfam OST-HTH/LOTUS domain 254 308 IPR025605 -
Mupr12152g00002 600 CDD LOTUS 245 312 - -
Mupr12152g00002 600 ProSiteProfiles OST-type HTH domain profile. 243 314 IPR025605 -
Mupr12152g00002 600 MobiDBLite consensus disorder prediction 432 472 - -
Mupr12152g00002 600 Pfam NYN domain 40 175 IPR021139 GO:0004540
Mupr12152g00002 600 CDD PIN_limkain_b1_N_like 40 163 - -
Mupr12152g00002 600 Gene3D - 34 180 - -
Mupr12152g00002 600 Gene3D - 241 318 IPR041966 -
Mupr12152g00002 600 MobiDBLite consensus disorder prediction 569 585 - -
Mupr12152g00002 600 MobiDBLite consensus disorder prediction 569 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12152g00002 Mupr-Chr12152 5182 7065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12152g00002 40 206 C2H2 Transcription Factor Family AT5G61190 44.048 2.52e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12152g00002 - - ccaj:109796744 793.112