Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12130g00004 ATGGGTGAGTCAGACAACGAGTCAGGAGGTCAAAGAGGAAACGTCAGCGAGTTATCAGGCTGCAGAGAGCAAGACCGCTACCTTCCGATCGCTAACGTAAGCAGGATCATGAAGAAGGCGCTACCTGCTAACGCTAAGATCTCTAAGGAGGCCAAGGAAACGGTTCAGGAGTGCGTCTCTGAGTTCATCAGCTTCATTACAGGGGAAGCGTCCGATAAGTGCCAGAAGGAGAAGAGAAAGACTATCAACGGCGACGATCTTCTCTGGGCCATGACCACTCTTGGCTTTGAGGACTATGTCGAACCCCTCAAGATTTACCTCCACAAGTTTAGAGAGATCGAGGGTGATAAAACTTCTATCATTGGAAAGCCTCATGCTTCTGATCAGACGGATGACCCTTATGCTCATGTAACTACCCCTATGATCATGATGATGGGCCATCATCATCACCATCAAGGACACGTCTATGAATCACCGTCTTCTTCTGCAAGAACTAGATAG 501 0.483 MGESDNESGGQRGNVSELSGCREQDRYLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKIYLHKFREIEGDKTSIIGKPHASDQTDDPYAHVTTPMIMMMGHHHHHQGHVYESPSSSARTR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12130g00004 166 MobiDBLite consensus disorder prediction 1 20 - -
Mupr12130g00004 166 SUPERFAMILY Histone-fold 24 147 IPR009072 GO:0046982
Mupr12130g00004 166 FunFam Nuclear transcription factor Y subunit B-3 16 139 - -
Mupr12130g00004 166 MobiDBLite consensus disorder prediction 1 18 - -
Mupr12130g00004 166 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 139 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr12130g00004 166 Gene3D Histone, subunit A 16 137 IPR009072 GO:0046982
Mupr12130g00004 166 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr12130g00004 166 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Mupr12130g00004 166 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Mupr12130g00004 166 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Mupr12130g00004 166 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12130g00004 Mupr-Chr12130 27429 27929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12130g00004 1 123 CCAAT-HAP3 Transcription Factor Family AT4G14540 80.000 1.83e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr12130g00004 CBFD_NFYB_HMF 1.6e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12130g00004 K08065 - gmx:100305641 249.98