Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12130g00002 ATGGGCAATGTCAATGGGAGAGACGATGTGAATGGTACTCCATCGGGGACCGAAGGAGAAGAAGAAGAAGAAGAAGACGACGATGAGAAAGAAGAAGACCACGCTGTCGCCGATTGCATGTCTTCCAACCCTGCCTATCGTGCGCCTTCCCAGTTGATGGGTCATTCTCCTCCCGCTAGCCCTAGAGCCACCCAATCACCCTTCATGTTCGCCCCACAAGTCCCGGTGGTTCCGCTACAAAGACCTGATGAGATGCATGCTCCAAGCCCTTCTTGGATGCAGACTACGTCAGGGTATGAGGATATGTACAGTGAACTAGGAATTCCGACGATGATTACTTGGAGTTATGATGGGAAGGAAGTGGCTGTGGAGGGATCGTGGGATAATTGGAAAACAAGAATGCTCTTACAGCGATCAGGGAAGGACTTCACAATAATGAAGGTGCTACCCTCTGGTGTATACCAATTTAGATTTATTGTGGATGGACAGTGGAGGTATGCACCTGACTTGCCTTGGGCTCAAGATGATGCAGGAAATGCCTACAACATTTTGGACTTGCAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTAGTTTTGAACCTCCTAAATCACCAGACTCTAGCTATAACAACTTACAACTTAGTTCTGAAGATTATGCAAAGGAGCCGCCATTGGTTCCTCCATATTTGCAAATGACGCTTCTTAATGTTCCGTCAACAAATATGGAAATTCAACCTCTTGCATCCAGACCTCAGCATGTAATACTCAATCATCTTTACATGCAGAAAGGGAAGGGTAGCCCTTCAGTGGTTGCTCTTGGTACAACTCATCGCTTTCTAGCCAAATATGTCACTGTCGTGCTGTACAAGTCTTTGCAGAGGTAA 888 0.4628 MGNVNGRDDVNGTPSGTEGEEEEEEDDDEKEEDHAVADCMSSNPAYRAPSQLMGHSPPASPRATQSPFMFAPQVPVVPLQRPDEMHAPSPSWMQTTSGYEDMYSELGIPTMITWSYDGKEVAVEGSWDNWKTRMLLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIGSISSFEPPKSPDSSYNNLQLSSEDYAKEPPLVPPYLQMTLLNVPSTNMEIQPLASRPQHVILNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12130g00002 295 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 295 IPR043554 -
Mupr12130g00002 295 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 221 291 IPR006828 GO:0005515
Mupr12130g00002 295 Gene3D - 196 293 - -
Mupr12130g00002 295 SUPERFAMILY AMPKBI-like 190 292 IPR037256 -
Mupr12130g00002 295 Gene3D Immunoglobulins 103 190 IPR013783 -
Mupr12130g00002 295 MobiDBLite consensus disorder prediction 1 66 - -
Mupr12130g00002 295 SUPERFAMILY E set domains 108 193 IPR014756 -
Mupr12130g00002 295 CDD E_set_AMPKbeta_like_N 109 185 - -
Mupr12130g00002 295 SMART AMPKBI_2 203 293 IPR006828 GO:0005515
Mupr12130g00002 295 MobiDBLite consensus disorder prediction 15 33 - -
Mupr12130g00002 295 Pfam Glycogen recognition site of AMP-activated protein kinase 108 187 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12130g00002 Mupr-Chr12130 11214 13874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12130g00002 107 188 Protein tyrosine phosphatase (PTP) family AT3G01510 31.818 6.92e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12130g00002 K07199 - gmx:100777497 554.673