Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12115g00001 ATGCCCCAAATAAAGCTAGAGTGTGTCTCCATACCTGATAAAGGAAGAGGAATGGTGTCGTCATGTGTCATTTCACCAGGTTCTTTGGTTCATGCTGAAGAACCGTATGCTATGATAATATTAAAGCAGTGTCGGGAAACTCATTGCCATTATTGCCTGAATGACCTACCTGCCGATAGAGTTCCTTGTATATCATGTTCAATACCATTGTATTGTTCCCACCAATGCCAGATACGGGCAGGTGGGCAAATGTTCAGGATTTACCCAGAAAATAATGGCATTTTTAAAAACATACCCAGTGATCTTGGAGAATATGCTGCTGAAGTTATTCAATACAATGATTCTGAACAAGAAATTGAGGATATTACTGAACATAAACATGAATGTCAAGGTGTACATTGGCCTGTGGTACTGCCATCTGAGATAGTTTTGGCTGGCCGAATACTTGCAAGGTTTTTGTTGAATAGCACATCTGAAGATATTATAAACTTTGTGGAAAGACTGGAACTTTCTCATTGTTACAAACATATGCCATCTGAAAGCAAATTGGATTCACATATATATGCCATTGTATTATTATATTGTCTTCGACACTCTCGTGGAACTATGTTTTCCATAGATGGAGTCTCCATATCACAGTTACTGAACCATCATACACCATGTGTAGTAGAACATTTTTCCAATAGGATGGAGCAAGTTGTCATAATTATTTCTCAAATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCAAGGACTATCAGGTCATTTTGGAGAATTTCCATTTCAATCTGGCGCACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGCAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGCACTCTTTATTTACGAACCACAGAAGTTGTATCAGCTGGGTGTCAGCTAGAATTGTCTTATGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCTTAATTTTCTCAAAGATGAGTATGCGTTTCATTGTCAGTGTACTGGTTGTTCAGAAGTCAATCTATCTGACATTGTCCTCAATGCCTTCCATTGCGTCAATCCAAATTGTTCTGGTGCAGTGTTGGAAAGCAGAGTACTTGACTATGAAAAGCAGAAAGTCAAGCACTTCCCTATTATTGACAATGTTGACAAGAATGGTGACATTTACGAAGTATGTCTTTGTGTCTCCGAACAAAATGGTGCCTCTATTCATATTCGACCTGGATACTGTTTGAAATGTGGCTCTTACTGTGATTTGGAGTCTTCACATGCTGCAGTCAGTAAAGCTTTAATATGCATAAAAAGGTTGCAGGATTCAATATTGTCAAAAGAAATTTCAAGTATTACTATTTCTAATGCTTTGAGATCTCTTCATTTGCTAAGATTAAATTTGCATGCATACAACAAGATTATTGCAGAGGCAGAAGACAACATAGCCCAGGCTTTTTTTTTAGTGGGACAATTACAATTATCTGTGGATCATTGTAAAGCATCTATCCAGATTTTGGAGAAGCTATACGACACTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCCTCCATCCAACATTCCTTGGATGATGGTACTGCTGTGGACAGCATAAGTCGAATAGATGATATCTTCTCACGATATTATGGACTTCATGCAGACTTGGTCTTCCCTTATCTTCAATACCTTAGGAGAGAAATTGAGAAATTTTCAGTGAAGGCTCTCCAATCAAATGCTTTTCCAACAAAG 1806 0.3771 MPQIKLECVSIPDKGRGMVSSCVISPGSLVHAEEPYAMIILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQIRAGGQMFRIYPENNGIFKNIPSDLGEYAAEVIQYNDSEQEIEDITEHKHECQGVHWPVVLPSEIVLAGRILARFLLNSTSEDIINFVERLELSHCYKHMPSESKLDSHIYAIVLLYCLRHSRGTMFSIDGVSISQLLNHHTPCVVEHFSNRMEQVVIIISQIKVNCMTVVRLKSIDAQGLSGHFGEFPFQSGAHLTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFLSRTLYLRTTEVVSAGCQLELSYGPQVGLWDCKDRLNFLKDEYAFHCQCTGCSEVNLSDIVLNAFHCVNPNCSGAVLESRVLDYEKQKVKHFPIIDNVDKNGDIYEVCLCVSEQNGASIHIRPGYCLKCGSYCDLESSHAAVSKALICIKRLQDSILSKEISSITISNALRSLHLLRLNLHAYNKIIAEAEDNIAQAFFLVGQLQLSVDHCKASIQILEKLYDTDDIVIAYELVKLSSIQHSLDDGTAVDSISRIDDIFSRYYGLHADLVFPYLQYLRREIEKFSVKALQSNAFPTK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12115g00001 602 Pfam SET domain 15 329 IPR001214 GO:0005515
Mupr12115g00001 602 ProSiteProfiles SET domain profile. 4 329 IPR001214 GO:0005515
Mupr12115g00001 602 Coils Coil 478 498 - -
Mupr12115g00001 602 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 589 - -
Mupr12115g00001 602 SUPERFAMILY SET domain 6 354 IPR046341 -
Mupr12115g00001 602 Gene3D Tetratricopeptide repeat domain 334 590 IPR011990 GO:0005515
Mupr12115g00001 602 Gene3D SET domain 227 328 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr12115g00001 SET 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12115g00001 K24634 - gmx:100783548 1015.76