Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1210g00001 ATGCAAACTCATTCTTTCTCCTACATATCCTCTTGTCCTGGTGGTGCCTTCTTGGAACCTGATCATGAGGCTGTGGATGAAGCCTCCATCTCCCTCTCTCTTGGCCCTCCTGGCCAACAACACAACAACCCCAAAACCTCTTCCTCCTCCTCTAACCACCCTTCCACTCTGCACCATTACCAGCAAAACCCTATTTCTGATGACCAGAGAGGTGTAACTGTGGCCCTTCACATTGGCCTTCCCAGTCCCACCACTTCACCAAACAGTGCCACCCTCACTAGCAAGCCTGATCTTCATTTGGCCTCTGCTCCCATCCAGGGTCAATACTGGATCCCTTCTCCTGCTCAAATCCTCATTGGCCCTACTCAGTTCTCTTGCAGTGTCTGCAACAAAATGTTTAACCGTTTCAACAACATGCAGATGCACATGTGGGGACACGGGTCACAATACAGGAAAGGACCCGAATCATTGAGAGGGGCAAAACCAGCTTCTTCAATGCTGAGGCTTCCCTGCTATTGTTGTGCTGAGGGTTGCAAGAACAACATAGACCATCCAAGGTCAAGGCCACTGAAGGATTTCAGGACCCTTCAGACACACTATAAGAGGAAGCATGGAGCAAAACCATTCGGGTGCAGAAAGTGTGGCAAGCCATTTGCTGTGAGAGGGGATTGGAGGACACACGAGAAGAATTGTGGCAAGCTTTGGTTCTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCCCTCAAAGACCATGTTCGCGCCTTTGGTGATGGCCATGCTCCTCACACTGTGGAGAGCTGTGATCAGATGGGGGAAGATGATTTGTTAGGCGATGAAGATGATGAGGAATTAGAACTAGAAGATGATGATGAAGATTATAACAGTAATGAAGTTGTTTATGGGTGCGAGAAGATGGAGACAAACAGTGAAATGAAAGCTAAGGTTCTTGCATTTAATGCCAGAAGTGGCAGTCTTATCTAA 984 0.4807 MQTHSFSYISSCPGGAFLEPDHEAVDEASISLSLGPPGQQHNNPKTSSSSSNHPSTLHHYQQNPISDDQRGVTVALHIGLPSPTTSPNSATLTSKPDLHLASAPIQGQYWIPSPAQILIGPTQFSCSVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQMGEDDLLGDEDDEELELEDDDEDYNSNEVVYGCEKMETNSEMKAKVLAFNARSGSLI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1210g00001 327 PANTHER ZINC FINGER PROTEIN WIP2 25 283 IPR043584 GO:0003700|GO:0010468
Mupr1210g00001 327 MobiDBLite consensus disorder prediction 31 63 - -
Mupr1210g00001 327 MobiDBLite consensus disorder prediction 33 63 - -
Mupr1210g00001 327 Gene3D Classic Zinc Finger 168 254 - -
Mupr1210g00001 327 SUPERFAMILY beta-beta-alpha zinc fingers 192 229 IPR036236 -
Mupr1210g00001 327 FunFam Zinc finger protein WIP2 178 260 - -
Mupr1210g00001 327 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Mupr1210g00001 327 SUPERFAMILY beta-beta-alpha zinc fingers 109 145 IPR036236 -
Mupr1210g00001 327 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1210g00001 Mupr-Chr1210 10126 12442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1210g00001 26 265 C2H2 Transcription Factor Family AT1G13290 74.180 1.23e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1210g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1210g00001 - - aprc:113870355 565.074